Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NPAS1Q99742 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.03■□□□□ 0.8
NPAS1Q99742 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.03■□□□□ 0.8
NPAS1Q99742 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.03■□□□□ 0.8
NPAS1Q99742 AC010525.1-201ENST00000585559 441 ntBASIC20.03■□□□□ 0.8
NPAS1Q99742 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.03■□□□□ 0.8
NPAS1Q99742 AL138724.1-201ENST00000606771 1088 ntBASIC20.03■□□□□ 0.8
NPAS1Q99742 AC011298.3-201ENST00000615796 283 ntBASIC20.03■□□□□ 0.8
NPAS1Q99742 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS1Q99742 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.03■□□□□ 0.8
NPAS1Q99742 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.03■□□□□ 0.8
NPAS1Q99742 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS1Q99742 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS1Q99742 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS1Q99742 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS1Q99742 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NPAS1Q99742 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS1Q99742 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS1Q99742 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
NPAS1Q99742 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
NPAS1Q99742 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.02■□□□□ 0.8
NPAS1Q99742 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.02■□□□□ 0.8
NPAS1Q99742 AC136469.2-201ENST00000623944 1028 ntBASIC20.02■□□□□ 0.8
NPAS1Q99742 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.02■□□□□ 0.8
NPAS1Q99742 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS1Q99742 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
NPAS1Q99742 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NPAS1Q99742 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
NPAS1Q99742 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS1Q99742 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.02■□□□□ 0.79
NPAS1Q99742 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
NPAS1Q99742 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.79
NPAS1Q99742 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS1Q99742 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.02■□□□□ 0.79
NPAS1Q99742 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS1Q99742 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.01■□□□□ 0.79
NPAS1Q99742 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS1Q99742 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS1Q99742 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS1Q99742 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NPAS1Q99742 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NPAS1Q99742 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.01■□□□□ 0.79
NPAS1Q99742 AL031432.3-201ENST00000607698 485 ntBASIC20.01■□□□□ 0.79
NPAS1Q99742 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.01■□□□□ 0.79
NPAS1Q99742 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.01■□□□□ 0.79
NPAS1Q99742 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS1Q99742 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS1Q99742 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS1Q99742 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20■□□□□ 0.79
NPAS1Q99742 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20■□□□□ 0.79
NPAS1Q99742 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20■□□□□ 0.79
NPAS1Q99742 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS1Q99742 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS1Q99742 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20■□□□□ 0.79
NPAS1Q99742 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS1Q99742 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.99■□□□□ 0.79
NPAS1Q99742 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.99■□□□□ 0.79
NPAS1Q99742 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS1Q99742 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NPAS1Q99742 MIR638-201ENST00000385237 100 ntBASIC19.99■□□□□ 0.79
NPAS1Q99742 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.99■□□□□ 0.79
NPAS1Q99742 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.99■□□□□ 0.79
NPAS1Q99742 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS1Q99742 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS1Q99742 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS1Q99742 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS1Q99742 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS1Q99742 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NPAS1Q99742 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NPAS1Q99742 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS1Q99742 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS1Q99742 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS1Q99742 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NPAS1Q99742 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NPAS1Q99742 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS1Q99742 SLC47A1P1-202ENST00000449666 945 ntBASIC19.98■□□□□ 0.79
NPAS1Q99742 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS1Q99742 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS1Q99742 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS1Q99742 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS1Q99742 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NPAS1Q99742 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS1Q99742 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS1Q99742 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS1Q99742 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.97■□□□□ 0.79
NPAS1Q99742 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS1Q99742 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS1Q99742 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS1Q99742 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS1Q99742 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS1Q99742 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.96■□□□□ 0.79
NPAS1Q99742 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NPAS1Q99742 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS1Q99742 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.96■□□□□ 0.79
NPAS1Q99742 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.96■□□□□ 0.79
NPAS1Q99742 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS1Q99742 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
NPAS1Q99742 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.96■□□□□ 0.79
NPAS1Q99742 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.96■□□□□ 0.79
NPAS1Q99742 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms