Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPT1AP50416 AL353803.4-201ENST00000565882 1934 ntBASIC24.61■■□□□ 1.53
CPT1AP50416 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CPT1AP50416 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.6■■□□□ 1.53
CPT1AP50416 AC080038.1-201ENST00000611274 1154 ntBASIC24.6■■□□□ 1.53
CPT1AP50416 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CPT1AP50416 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.6■■□□□ 1.53
CPT1AP50416 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
CPT1AP50416 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CPT1AP50416 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CPT1AP50416 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CPT1AP50416 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CPT1AP50416 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CPT1AP50416 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.59■■□□□ 1.53
CPT1AP50416 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CPT1AP50416 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CPT1AP50416 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CPT1AP50416 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.59■■□□□ 1.53
CPT1AP50416 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CPT1AP50416 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.59■■□□□ 1.53
CPT1AP50416 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.59■■□□□ 1.53
CPT1AP50416 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CPT1AP50416 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.58■■□□□ 1.53
CPT1AP50416 AP004607.4-201ENST00000530158 1459 ntBASIC24.58■■□□□ 1.53
CPT1AP50416 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CPT1AP50416 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.58■■□□□ 1.53
CPT1AP50416 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CPT1AP50416 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CPT1AP50416 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.58■■□□□ 1.53
CPT1AP50416 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
CPT1AP50416 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CPT1AP50416 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CPT1AP50416 AC004812.2-201ENST00000611079 2094 ntBASIC24.58■■□□□ 1.53
CPT1AP50416 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CPT1AP50416 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CPT1AP50416 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.58■■□□□ 1.52
CPT1AP50416 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPT1AP50416 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CPT1AP50416 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPT1AP50416 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPT1AP50416 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CPT1AP50416 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPT1AP50416 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.57■■□□□ 1.52
CPT1AP50416 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.57■■□□□ 1.52
CPT1AP50416 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.57■■□□□ 1.52
CPT1AP50416 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.57■■□□□ 1.52
CPT1AP50416 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.57■■□□□ 1.52
CPT1AP50416 SMUG1P1-201ENST00000590640 811 ntBASIC24.57■■□□□ 1.52
CPT1AP50416 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.57■■□□□ 1.52
CPT1AP50416 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.57■■□□□ 1.52
CPT1AP50416 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPT1AP50416 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.56■■□□□ 1.52
CPT1AP50416 AC004854.2-201ENST00000608450 1441 ntBASIC24.56■■□□□ 1.52
CPT1AP50416 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CPT1AP50416 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.56■■□□□ 1.52
CPT1AP50416 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPT1AP50416 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.56■■□□□ 1.52
CPT1AP50416 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CPT1AP50416 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPT1AP50416 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPT1AP50416 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CPT1AP50416 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.55■■□□□ 1.52
CPT1AP50416 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CPT1AP50416 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
CPT1AP50416 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.55■■□□□ 1.52
CPT1AP50416 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.55■■□□□ 1.52
CPT1AP50416 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.55■■□□□ 1.52
CPT1AP50416 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.55■■□□□ 1.52
CPT1AP50416 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CPT1AP50416 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPT1AP50416 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPT1AP50416 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.54■■□□□ 1.52
CPT1AP50416 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.54■■□□□ 1.52
CPT1AP50416 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPT1AP50416 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CPT1AP50416 KRT19P1-201ENST00000405746 1186 ntBASIC24.54■■□□□ 1.52
CPT1AP50416 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPT1AP50416 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPT1AP50416 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPT1AP50416 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.54■■□□□ 1.52
CPT1AP50416 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPT1AP50416 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPT1AP50416 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CPT1AP50416 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CPT1AP50416 HLA-L-209ENST00000420110 1011 ntBASIC24.53■■□□□ 1.52
CPT1AP50416 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.53■■□□□ 1.52
CPT1AP50416 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.53■■□□□ 1.52
CPT1AP50416 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.53■■□□□ 1.52
CPT1AP50416 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CPT1AP50416 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CPT1AP50416 OXCT2P1-201ENST00000447263 1535 ntBASIC24.52■■□□□ 1.52
CPT1AP50416 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CPT1AP50416 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.52■■□□□ 1.52
CPT1AP50416 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.52■■□□□ 1.52
CPT1AP50416 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.52■■□□□ 1.52
CPT1AP50416 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CPT1AP50416 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.52■■□□□ 1.52
CPT1AP50416 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPT1AP50416 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPT1AP50416 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms