Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTR3AP46098 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HTR3AP46098 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HTR3AP46098 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HTR3AP46098 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HTR3AP46098 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR3AP46098 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HTR3AP46098 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.21■□□□□ 0.83
HTR3AP46098 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.21■□□□□ 0.83
HTR3AP46098 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HTR3AP46098 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR3AP46098 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR3AP46098 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR3AP46098 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR3AP46098 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HTR3AP46098 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR3AP46098 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR3AP46098 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR3AP46098 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HTR3AP46098 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HTR3AP46098 AC009086.3-201ENST00000623486 1008 ntBASIC20.2■□□□□ 0.82
HTR3AP46098 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR3AP46098 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR3AP46098 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR3AP46098 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HTR3AP46098 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR3AP46098 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.2■□□□□ 0.82
HTR3AP46098 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTR3AP46098 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.19■□□□□ 0.82
HTR3AP46098 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.19■□□□□ 0.82
HTR3AP46098 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
HTR3AP46098 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HTR3AP46098 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTR3AP46098 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.19■□□□□ 0.82
HTR3AP46098 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.19■□□□□ 0.82
HTR3AP46098 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HTR3AP46098 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTR3AP46098 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.19■□□□□ 0.82
HTR3AP46098 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.19■□□□□ 0.82
HTR3AP46098 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.19■□□□□ 0.82
HTR3AP46098 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.19■□□□□ 0.82
HTR3AP46098 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.19■□□□□ 0.82
HTR3AP46098 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTR3AP46098 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HTR3AP46098 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTR3AP46098 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTR3AP46098 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.18■□□□□ 0.82
HTR3AP46098 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTR3AP46098 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HTR3AP46098 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTR3AP46098 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HTR3AP46098 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTR3AP46098 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HTR3AP46098 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTR3AP46098 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.17■□□□□ 0.82
HTR3AP46098 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HTR3AP46098 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.17■□□□□ 0.82
HTR3AP46098 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.17■□□□□ 0.82
HTR3AP46098 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.17■□□□□ 0.82
HTR3AP46098 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTR3AP46098 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTR3AP46098 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.17■□□□□ 0.82
HTR3AP46098 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.17■□□□□ 0.82
HTR3AP46098 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.17■□□□□ 0.82
HTR3AP46098 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.17■□□□□ 0.82
HTR3AP46098 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR3AP46098 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.16■□□□□ 0.82
HTR3AP46098 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR3AP46098 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HTR3AP46098 AL137060.1-201ENST00000618151 2648 ntBASIC20.16■□□□□ 0.82
HTR3AP46098 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.16■□□□□ 0.82
HTR3AP46098 SRD5A1P1-201ENST00000442297 786 ntBASIC20.16■□□□□ 0.82
HTR3AP46098 AC092171.4-201ENST00000609130 632 ntBASIC20.16■□□□□ 0.82
HTR3AP46098 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.16■□□□□ 0.82
HTR3AP46098 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.16■□□□□ 0.82
HTR3AP46098 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR3AP46098 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HTR3AP46098 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HTR3AP46098 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR3AP46098 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.16■□□□□ 0.82
HTR3AP46098 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HTR3AP46098 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.15■□□□□ 0.82
HTR3AP46098 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.15■□□□□ 0.82
HTR3AP46098 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.15■□□□□ 0.82
HTR3AP46098 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.15■□□□□ 0.82
HTR3AP46098 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.15■□□□□ 0.82
HTR3AP46098 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR3AP46098 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HTR3AP46098 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms