Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 NRK1YNL129W 723 nt3.83□□□□□ -1.8
TDA11P38854 VPS68YOL129W 555 nt3.83□□□□□ -1.8
TDA11P38854 RRP40YOL142W 723 nt3.83□□□□□ -1.8
TDA11P38854 GCR1YPL075W 2358 nt3.83□□□□□ -1.8
TDA11P38854 ATG21YPL100W 1491 nt3.82□□□□□ -1.8
TDA11P38854 FAD1YDL045C 921 nt3.82□□□□□ -1.8
TDA11P38854 RPC53YDL150W 1269 nt3.82□□□□□ -1.8
TDA11P38854 RRP1YDR087C 837 nt3.82□□□□□ -1.8
TDA11P38854 SEC53YFL045C 765 nt3.82□□□□□ -1.8
TDA11P38854 SRB5YGR104C 924 nt3.82□□□□□ -1.8
TDA11P38854 EFB1YAL003W 621 nt3.82□□□□□ -1.8
TDA11P38854 FMP46YKR049C 402 nt3.82□□□□□ -1.8
TDA11P38854 YOR131CYOR131C 657 nt3.82□□□□□ -1.8
TDA11P38854 IDI1YPL117C 867 nt3.82□□□□□ -1.8
TDA11P38854 GLN4YOR168W 2430 nt3.82□□□□□ -1.8
TDA11P38854 SIR1YKR101W 1965 nt3.82□□□□□ -1.8
TDA11P38854 HMG1YML075C 3165 nt3.81□□□□□ -1.8
TDA11P38854 HOM2YDR158W 1098 nt3.81□□□□□ -1.8
TDA11P38854 SNL1YIL016W 480 nt3.81□□□□□ -1.8
TDA11P38854 DSC2YOL073C 969 nt3.81□□□□□ -1.8
TDA11P38854 SNF8YPL002C 702 nt3.81□□□□□ -1.8
TDA11P38854 YAR1YPL239W 603 nt3.81□□□□□ -1.8
TDA11P38854 snR37snR37 386 nt3.81□□□□□ -1.8
TDA11P38854 APE2YKL157W 2859 nt3.81□□□□□ -1.8
TDA11P38854 TRM13YOL125W 1431 nt3.8□□□□□ -1.8
TDA11P38854 PHO13YDL236W 939 nt3.8□□□□□ -1.8
TDA11P38854 YGL199CYGL199C 471 nt3.8□□□□□ -1.8
TDA11P38854 WSS1YHR134W 810 nt3.8□□□□□ -1.8
TDA11P38854 PIR3YKL163W 978 nt3.8□□□□□ -1.8
TDA11P38854 POP3YNL282W 588 nt3.8□□□□□ -1.8
TDA11P38854 YNR061CYNR061C 660 nt3.8□□□□□ -1.8
TDA11P38854 YLR352WYLR352W 2424 nt3.8□□□□□ -1.8
TDA11P38854 KIP3YGL216W 2418 nt3.79□□□□□ -1.8
TDA11P38854 HSP30YCR021C 999 nt3.79□□□□□ -1.8
TDA11P38854 MMS21YEL019C 804 nt3.79□□□□□ -1.8
TDA11P38854 SRP40YKR092C 1221 nt3.79□□□□□ -1.8
TDA11P38854 MMM1YLL006W 1281 nt3.79□□□□□ -1.8
TDA11P38854 RPL19AYBR084C-A 570 nt3.79□□□□□ -1.8
TDA11P38854 NUP133YKR082W 3474 nt3.78□□□□□ -1.8
TDA11P38854 TRM11YOL124C 1302 nt3.78□□□□□ -1.8
TDA11P38854 SPT4YGR063C 309 nt3.78□□□□□ -1.8
TDA11P38854 DAN1YJR150C 897 nt3.78□□□□□ -1.8
TDA11P38854 FOL3YMR113W 1284 nt3.78□□□□□ -1.8
TDA11P38854 CDC9YDL164C 2268 nt3.78□□□□□ -1.8
TDA11P38854 YML020WYML020W 1995 nt3.78□□□□□ -1.8
TDA11P38854 ALA1YOR335C 2877 nt3.77□□□□□ -1.81
TDA11P38854 SYF1YDR416W 2580 nt3.77□□□□□ -1.81
TDA11P38854 GPB1YOR371C 2694 nt3.77□□□□□ -1.81
TDA11P38854 YDR246W-AYDR246W-A 201 nt3.77□□□□□ -1.81
TDA11P38854 BUD25YER014C-A 462 nt3.77□□□□□ -1.81
TDA11P38854 YGR273CYGR273C 525 nt3.77□□□□□ -1.81
TDA11P38854 YHR137C-AYHR137C-A 651 nt3.77□□□□□ -1.81
TDA11P38854 BNA1YJR025C 534 nt3.77□□□□□ -1.81
TDA11P38854 YPR174CYPR174C 666 nt3.77□□□□□ -1.81
TDA11P38854 YOL019WYOL019W 1656 nt3.77□□□□□ -1.81
TDA11P38854 ASI1YMR119W 1875 nt3.77□□□□□ -1.81
TDA11P38854 YER077CYER077C 2067 nt3.77□□□□□ -1.81
TDA11P38854 FAT1YBR041W 2010 nt3.77□□□□□ -1.81
TDA11P38854 NTA1YJR062C 1374 nt3.76□□□□□ -1.81
TDA11P38854 ARO9YHR137W 1542 nt3.76□□□□□ -1.81
TDA11P38854 GLO3YER122C 1482 nt3.76□□□□□ -1.81
TDA11P38854 NAM9YNL137C 1461 nt3.76□□□□□ -1.81
TDA11P38854 YDL228CYDL228C 642 nt3.76□□□□□ -1.81
TDA11P38854 YDR464C-AYDR464C-A 189 nt3.76□□□□□ -1.81
TDA11P38854 BUD16YEL029C 939 nt3.76□□□□□ -1.81
TDA11P38854 YHL026CYHL026C 948 nt3.76□□□□□ -1.81
TDA11P38854 YLR326WYLR326W 723 nt3.76□□□□□ -1.81
TDA11P38854 LTO1YNL260C 597 nt3.76□□□□□ -1.81
TDA11P38854 FBP26YJL155C 1359 nt3.76□□□□□ -1.81
TDA11P38854 MET17YLR303W 1335 nt3.75□□□□□ -1.81
TDA11P38854 NFI1YOR156C 2181 nt3.75□□□□□ -1.81
TDA11P38854 MRPL11YDL202W 750 nt3.75□□□□□ -1.81
TDA11P38854 DOS2YDR068W 933 nt3.75□□□□□ -1.81
TDA11P38854 API2YDR525W 330 nt3.75□□□□□ -1.81
TDA11P38854 CDC12YHR107C 1224 nt3.75□□□□□ -1.81
TDA11P38854 SOD1YJR104C 465 nt3.75□□□□□ -1.81
TDA11P38854 YIM2YMR151W 438 nt3.75□□□□□ -1.81
TDA11P38854 RNA1YMR235C 1224 nt3.75□□□□□ -1.81
TDA11P38854 ATG8YBL078C 354 nt3.75□□□□□ -1.81
TDA11P38854 LDS2YOL047C 1071 nt3.75□□□□□ -1.81
TDA11P38854 RSC3YDR303C 2658 nt3.75□□□□□ -1.81
TDA11P38854 NAM2YLR382C 2685 nt3.75□□□□□ -1.81
TDA11P38854 RKM3YBR030W 1659 nt3.75□□□□□ -1.81
TDA11P38854 TAF1YGR274C 3201 nt3.74□□□□□ -1.81
TDA11P38854 DHR2YKL078W 2208 nt3.74□□□□□ -1.81
TDA11P38854 FLC1YPL221W 2382 nt3.74□□□□□ -1.81
TDA11P38854 YCR101CYCR101C 549 nt3.74□□□□□ -1.81
TDA11P38854 ANB1YJR047C 474 nt3.74□□□□□ -1.81
TDA11P38854 YBL036CYBL036C 774 nt3.74□□□□□ -1.81
TDA11P38854 RAD14YMR201C 1116 nt3.74□□□□□ -1.81
TDA11P38854 RNT1YMR239C 1416 nt3.74□□□□□ -1.81
TDA11P38854 WRS1YOL097C 1299 nt3.74□□□□□ -1.81
TDA11P38854 DSE3YOR264W 1293 nt3.74□□□□□ -1.81
TDA11P38854 NPL4YBR170C 1743 nt3.74□□□□□ -1.81
TDA11P38854 MIF2YKL089W 1650 nt3.74□□□□□ -1.81
TDA11P38854 MPC54YOR177C 1395 nt3.74□□□□□ -1.81
TDA11P38854 MTR4YJL050W 3222 nt3.74□□□□□ -1.81
TDA11P38854 BCH2YKR027W 2298 nt3.73□□□□□ -1.81
TDA11P38854 PUF2YPR042C 3228 nt3.73□□□□□ -1.81
TDA11P38854 TSR1YDL060W 2367 nt3.73□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms