RNA–Protein interactions for RNA: YPR042C

PUF2, Transcript of PUF family mRNA-binding protein, yeastyeast

Gene PUF2, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUF2YPR042C DRS1P32892 752 aaKnown RBP10.59□□□□□ -0.71
PUF2YPR042C MTC1P47018 478 aaKnown RBP9.73□□□□□ -0.85
PUF2YPR042C BFR2Q06631 534 aaKnown RBP9.5□□□□□ -0.89
PUF2YPR042C TFA1P36100 482 aa9.44□□□□□ -0.9
PUF2YPR042C AVT3P36062 692 aa8.82□□□□□ -1
PUF2YPR042C RQC2Q12532 1038 aaKnown RBP8.76□□□□□ -1.01
PUF2YPR042C DIP2Q12220 943 aaPredicted RBP8.73□□□□□ -1.01
PUF2YPR042C TAF7Q05021 590 aa8.17□□□□□ -1.1
PUF2YPR042C DMA1P38823 416 aa8.12□□□□□ -1.11
PUF2YPR042C RSE1Q04693 1361 aaKnown RBP8.01□□□□□ -1.13
PUF2YPR042C PTP3P40048 928 aa7.81□□□□□ -1.16
PUF2YPR042C LEO1P38439 464 aa7.73□□□□□ -1.17
PUF2YPR042C ISW2Q08773 1120 aa7.71□□□□□ -1.18
PUF2YPR042C RPL17AP05740 184 aaKnown RBP7.69□□□□□ -1.18
PUF2YPR042C RPL17BP46990 184 aaKnown RBP7.69□□□□□ -1.18
PUF2YPR042C RPG1P38249 964 aaKnown RBP7.63□□□□□ -1.19
PUF2YPR042C SSP1P38871 571 aa7.53□□□□□ -1.2
PUF2YPR042C REB1P21538 810 aa7.5□□□□□ -1.21
PUF2YPR042C RIM101P33400 625 aa7.5□□□□□ -1.21
PUF2YPR042C SPT21P35209 758 aa7.46□□□□□ -1.22
PUF2YPR042C LEU3P08638 886 aa7.42□□□□□ -1.22
PUF2YPR042C SAS10Q12136 610 aaPredicted RBP7.38□□□□□ -1.23
PUF2YPR042C PRI1P10363 409 aa7.37□□□□□ -1.23
PUF2YPR042C YAH1Q12184 172 aaKnown RBP7.36□□□□□ -1.23
PUF2YPR042C OXP1P28273 1286 aa7.34□□□□□ -1.23
PUF2YPR042C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
PUF2YPR042C YLR271WQ06152 274 aa7.27□□□□□ -1.25
PUF2YPR042C DMA2P53924 522 aa7.22□□□□□ -1.25
PUF2YPR042C YIL055CP40523 627 aaKnown RBP7.19□□□□□ -1.26
PUF2YPR042C MGA2P40578 1113 aa7.17□□□□□ -1.26
PUF2YPR042C RPN1P38764 993 aaKnown RBP7.15□□□□□ -1.27
PUF2YPR042C AAD16Q02895 342 aa7.13□□□□□ -1.27
PUF2YPR042C FAP1P53971 965 aa7.12□□□□□ -1.27
PUF2YPR042C CST9Q06032 482 aa7.1□□□□□ -1.27
PUF2YPR042C ABP1P15891 592 aaKnown RBP7.09□□□□□ -1.27
PUF2YPR042C TSR3Q12094 313 aaKnown RBP7.09□□□□□ -1.27
PUF2YPR042C RSM7P47150 247 aa7.08□□□□□ -1.28
PUF2YPR042C YKR023WP36119 530 aaKnown RBP7.05□□□□□ -1.28
PUF2YPR042C SPB4P25808 606 aaPredicted RBP7□□□□□ -1.29
PUF2YPR042C RLF2Q12495 606 aa7□□□□□ -1.29
PUF2YPR042C PSD2P53037 1138 aaKnown RBP6.97□□□□□ -1.29
PUF2YPR042C CKB1P43639 278 aa6.96□□□□□ -1.3
PUF2YPR042C VPS70P47161 811 aa6.94□□□□□ -1.3
PUF2YPR042C HOP09932 586 aa6.93□□□□□ -1.3
PUF2YPR042C RAM2P29703 316 aa6.93□□□□□ -1.3
PUF2YPR042C SET1P38827 1080 aaKnown RBP6.93□□□□□ -1.3
PUF2YPR042C AI2P03876 854 aa6.91□□□□□ -1.3
PUF2YPR042C TFC8Q12308 588 aa6.9□□□□□ -1.31
PUF2YPR042C YPR148CQ06523 435 aa6.89□□□□□ -1.31
PUF2YPR042C DCD1P06773 312 aa6.89□□□□□ -1.31
PUF2YPR042C KIN1P13185 1064 aa6.82□□□□□ -1.32
PUF2YPR042C RCR1P38212 213 aa6.81□□□□□ -1.32
PUF2YPR042C DSF2P38213 736 aa6.81□□□□□ -1.32
PUF2YPR042C IFH1P39520 1085 aa6.81□□□□□ -1.32
PUF2YPR042C BBC1P47068 1157 aa6.78□□□□□ -1.32
PUF2YPR042C PBS2P08018 668 aa6.78□□□□□ -1.32
PUF2YPR042C YNR021WP53723 404 aaKnown RBP6.76□□□□□ -1.33
PUF2YPR042C MRM1P25270 412 aa6.76□□□□□ -1.33
PUF2YPR042C GLC3P32775 704 aa6.75□□□□□ -1.33
PUF2YPR042C MRPL32P25348 183 aa6.75□□□□□ -1.33
PUF2YPR042C BCH2P36122 765 aa6.74□□□□□ -1.33
PUF2YPR042C CDC27P38042 758 aa6.73□□□□□ -1.33
PUF2YPR042C MAK11P20484 414 aaKnown RBP6.71□□□□□ -1.34
PUF2YPR042C HGH1P48362 394 aaKnown RBP6.7□□□□□ -1.34
PUF2YPR042C AIM7Q12156 149 aa6.69□□□□□ -1.34
PUF2YPR042C IES2P40154 320 aa6.68□□□□□ -1.34
PUF2YPR042C MAM3Q12296 706 aa6.68□□□□□ -1.34
PUF2YPR042C GUA1P38625 525 aaKnown RBP6.67□□□□□ -1.34
PUF2YPR042C EPS1P40557 701 aa6.67□□□□□ -1.34
PUF2YPR042C RTG3P38165 486 aa6.67□□□□□ -1.34
PUF2YPR042C DIT2P21595 489 aa6.66□□□□□ -1.34
PUF2YPR042C PRY3P47033 881 aa6.64□□□□□ -1.35
PUF2YPR042C COQ8P27697 501 aa6.63□□□□□ -1.35
PUF2YPR042C NUP42P49686 430 aaKnown RBP6.63□□□□□ -1.35
PUF2YPR042C YML020WQ03722 664 aa6.63□□□□□ -1.35
PUF2YPR042C BDF1P35817 686 aa6.61□□□□□ -1.35
PUF2YPR042C REF2P42073 533 aaPredicted RBP6.6□□□□□ -1.35
PUF2YPR042C MAK21Q12176 1025 aaKnown RBP6.57□□□□□ -1.36
PUF2YPR042C ATF2P53296 535 aa6.57□□□□□ -1.36
PUF2YPR042C TFB3Q03290 321 aa6.57□□□□□ -1.36
PUF2YPR042C VPS29P38759 282 aa6.56□□□□□ -1.36
PUF2YPR042C HPC2Q01448 625 aa6.56□□□□□ -1.36
PUF2YPR042C NOP8Q08287 484 aaPredicted RBP6.55□□□□□ -1.36
PUF2YPR042C SSA1P10591 642 aaKnown RBP6.54□□□□□ -1.36
PUF2YPR042C MIF2P35201 549 aa6.54□□□□□ -1.36
PUF2YPR042C SLX8P40072 274 aa6.53□□□□□ -1.36
PUF2YPR042C EDS1P38073 919 aa6.53□□□□□ -1.36
PUF2YPR042C GEF1P37020 779 aa6.52□□□□□ -1.37
PUF2YPR042C SUB2Q07478 446 aaKnown RBP6.51□□□□□ -1.37
PUF2YPR042C NOP53Q12080 455 aaKnown RBP6.51□□□□□ -1.37
PUF2YPR042C AIM44Q99299 758 aa6.51□□□□□ -1.37
PUF2YPR042C PKC1P24583 1151 aa6.51□□□□□ -1.37
PUF2YPR042C COX6P00427 148 aa6.5□□□□□ -1.37
PUF2YPR042C BRL1P38770 471 aa6.48□□□□□ -1.37
PUF2YPR042C SCY1P53009 804 aa6.48□□□□□ -1.37
PUF2YPR042C STS1P38637 319 aa6.47□□□□□ -1.37
PUF2YPR042C ORC1P54784 914 aaPredicted RBP6.47□□□□□ -1.37
PUF2YPR042C BIM1P40013 344 aa6.45□□□□□ -1.38
PUF2YPR042C YJL007CP47080 104 aa6.44□□□□□ -1.38
PUF2YPR042C YMR1P47147 688 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms