RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	DRS1	P32892	752 aa	Known RBP	12.54	□□□□□ -0.4
SNL1	YIL016W	MTC1	P47018	478 aa	Known RBP	11.81	□□□□□ -0.52
SNL1	YIL016W	BFR2	Q06631	534 aa	Known RBP	11.1	□□□□□ -0.63
SNL1	YIL016W	TFA1	P36100	482 aa		10.81	□□□□□ -0.68
SNL1	YIL016W	DIP2	Q12220	943 aa	Predicted RBP	10.46	□□□□□ -0.73
SNL1	YIL016W	AVT3	P36062	692 aa		10.45	□□□□□ -0.74
SNL1	YIL016W	RQC2	Q12532	1038 aa	Known RBP	9.79	□□□□□ -0.84
SNL1	YIL016W	RSE1	Q04693	1361 aa	Known RBP	9.68	□□□□□ -0.86
SNL1	YIL016W	ISW2	Q08773	1120 aa		9.48	□□□□□ -0.89
SNL1	YIL016W	RPG1	P38249	964 aa	Known RBP	9.39	□□□□□ -0.91
SNL1	YIL016W	RPL17A	P05740	184 aa	Known RBP	9.31	□□□□□ -0.92
SNL1	YIL016W	RPL17B	P46990	184 aa	Known RBP	9.31	□□□□□ -0.92
SNL1	YIL016W	DMA1	P38823	416 aa		9.23	□□□□□ -0.93
SNL1	YIL016W	PRI1	P10363	409 aa		9.15	□□□□□ -0.94
SNL1	YIL016W	REB1	P21538	810 aa		9.14	□□□□□ -0.95
SNL1	YIL016W	PTP3	P40048	928 aa		9.14	□□□□□ -0.95
SNL1	YIL016W	FAP1	P53971	965 aa		9.09	□□□□□ -0.95
SNL1	YIL016W	RIM101	P33400	625 aa		8.98	□□□□□ -0.97
SNL1	YIL016W	SPT21	P35209	758 aa		8.94	□□□□□ -0.98
SNL1	YIL016W	AAD16	Q02895	342 aa		8.92	□□□□□ -0.98
SNL1	YIL016W	SSP1	P38871	571 aa		8.88	□□□□□ -0.99
SNL1	YIL016W	TAF7	Q05021	590 aa		8.8	□□□□□ -1
SNL1	YIL016W	TSR3	Q12094	313 aa	Known RBP	8.79	□□□□□ -1
SNL1	YIL016W	YAH1	Q12184	172 aa	Known RBP	8.76	□□□□□ -1.01
SNL1	YIL016W	OXP1	P28273	1286 aa		8.75	□□□□□ -1.01
SNL1	YIL016W	YIL055C	P40523	627 aa	Known RBP	8.66	□□□□□ -1.02
SNL1	YIL016W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	8.66	□□□□□ -1.02	not detected
SNL1	YIL016W	LEO1	P38439	464 aa		8.64	□□□□□ -1.03
SNL1	YIL016W	YLR271W	Q06152	274 aa		8.62	□□□□□ -1.03
SNL1	YIL016W	YKR023W	P36119	530 aa	Known RBP	8.57	□□□□□ -1.04
SNL1	YIL016W	RSM7	P47150	247 aa		8.49	□□□□□ -1.05
SNL1	YIL016W	MGA2	P40578	1113 aa		8.47	□□□□□ -1.05
SNL1	YIL016W	PRY3	P47033	881 aa		8.46	□□□□□ -1.06
SNL1	YIL016W	HO	P09932	586 aa		8.44	□□□□□ -1.06
SNL1	YIL016W	SAS10	Q12136	610 aa	Predicted RBP	8.43	□□□□□ -1.06
SNL1	YIL016W	MRPL32	P25348	183 aa		8.41	□□□□□ -1.06
SNL1	YIL016W	CST9	Q06032	482 aa		8.4	□□□□□ -1.06
SNL1	YIL016W	DCD1	P06773	312 aa		8.38	□□□□□ -1.07
SNL1	YIL016W	TFC8	Q12308	588 aa		8.38	□□□□□ -1.07
SNL1	YIL016W	LEU3	P08638	886 aa		8.35	□□□□□ -1.07
SNL1	YIL016W	AI2	P03876	854 aa		8.3	□□□□□ -1.08
SNL1	YIL016W	PSD2	P53037	1138 aa	Known RBP	8.27	□□□□□ -1.09
SNL1	YIL016W	CDC27	P38042	758 aa		8.24	□□□□□ -1.09
SNL1	YIL016W	BCH2	P36122	765 aa		8.18	□□□□□ -1.1
SNL1	YIL016W	BBC1	P47068	1157 aa		8.18	□□□□□ -1.1
SNL1	YIL016W	RAM2	P29703	316 aa		8.15	□□□□□ -1.1
SNL1	YIL016W	RPN1	P38764	993 aa	Known RBP	8.14	□□□□□ -1.11
SNL1	YIL016W	SPB4	P25808	606 aa	Predicted RBP	8.13	□□□□□ -1.11
SNL1	YIL016W	SET1	P38827	1080 aa	Known RBP	8.12	□□□□□ -1.11
SNL1	YIL016W	DMA2	P53924	522 aa		8.12	□□□□□ -1.11
SNL1	YIL016W	MRM1	P25270	412 aa		8.09	□□□□□ -1.11
SNL1	YIL016W	EPS1	P40557	701 aa		8.08	□□□□□ -1.12
SNL1	YIL016W	VPS70	P47161	811 aa		8.08	□□□□□ -1.12
SNL1	YIL016W	RCR1	P38212	213 aa		8.06	□□□□□ -1.12
SNL1	YIL016W	CKB1	P43639	278 aa		8.02	□□□□□ -1.13
SNL1	YIL016W	BDF1	P35817	686 aa		8.01	□□□□□ -1.13
SNL1	YIL016W	RTG3	P38165	486 aa		8	□□□□□ -1.13
SNL1	YIL016W	YPR148C	Q06523	435 aa		7.99	□□□□□ -1.13
SNL1	YIL016W	YCK3	P39962	524 aa		7.98	□□□□□ -1.13
SNL1	YIL016W	IFH1	P39520	1085 aa		7.96	□□□□□ -1.14
SNL1	YIL016W	HAA1	Q12753	694 aa	Known RBP	7.95	□□□□□ -1.14
SNL1	YIL016W	SCY1	P53009	804 aa		7.93	□□□□□ -1.14
SNL1	YIL016W	MAK11	P20484	414 aa	Known RBP	7.92	□□□□□ -1.14
SNL1	YIL016W	PBS2	P08018	668 aa		7.89	□□□□□ -1.15
SNL1	YIL016W	DSF2	P38213	736 aa		7.86	□□□□□ -1.15
SNL1	YIL016W	VPS29	P38759	282 aa		7.86	□□□□□ -1.15
SNL1	YIL016W	COQ8	P27697	501 aa		7.84	□□□□□ -1.15
SNL1	YIL016W	ABP1	P15891	592 aa	Known RBP	7.82	□□□□□ -1.16
SNL1	YIL016W	MAP2	P38174	421 aa	Known RBP	7.82	□□□□□ -1.16
SNL1	YIL016W	RLF2	Q12495	606 aa		7.82	□□□□□ -1.16
SNL1	YIL016W	KIN1	P13185	1064 aa		7.81	□□□□□ -1.16
SNL1	YIL016W	MIF2	P35201	549 aa		7.8	□□□□□ -1.16
SNL1	YIL016W	YNR021W	P53723	404 aa	Known RBP	7.79	□□□□□ -1.16
SNL1	YIL016W	GLC3	P32775	704 aa		7.76	□□□□□ -1.17
SNL1	YIL016W	MAM3	Q12296	706 aa		7.76	□□□□□ -1.17
SNL1	YIL016W	REF2	P42073	533 aa	Predicted RBP	7.75	□□□□□ -1.17
SNL1	YIL016W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	7.74	□□□□□ -1.17	not detected
SNL1	YIL016W	UBP10	P53874	792 aa	Predicted RBP	7.74	□□□□□ -1.17
SNL1	YIL016W	DIT2	P21595	489 aa		7.73	□□□□□ -1.17
SNL1	YIL016W	EDS1	P38073	919 aa		7.73	□□□□□ -1.17
SNL1	YIL016W	IES2	P40154	320 aa		7.73	□□□□□ -1.17
SNL1	YIL016W	YFR006W	P43590	535 aa		7.73	□□□□□ -1.17
SNL1	YIL016W	SLX5	P32828	619 aa	Known RBP	7.72	□□□□□ -1.17
SNL1	YIL016W	NOP53	Q12080	455 aa	Known RBP	7.72	□□□□□ -1.17
SNL1	YIL016W	DBP1	P24784	617 aa	Known RBP	7.71	□□□□□ -1.18
SNL1	YIL016W	STS1	P38637	319 aa		7.71	□□□□□ -1.18
SNL1	YIL016W	NUP42	P49686	430 aa	Known RBP	7.69	□□□□□ -1.18
SNL1	YIL016W	AIM7	Q12156	149 aa		7.67	□□□□□ -1.18
SNL1	YIL016W	GUA1	P38625	525 aa	Known RBP	7.66	□□□□□ -1.18
SNL1	YIL016W	HGH1	P48362	394 aa	Known RBP	7.65	□□□□□ -1.18
SNL1	YIL016W	YGL015C	P33199	130 aa		7.64	□□□□□ -1.19
SNL1	YIL016W	PTC3	P34221	468 aa	Known RBP	7.64	□□□□□ -1.19
SNL1	YIL016W	ATF2	P53296	535 aa		7.64	□□□□□ -1.19
SNL1	YIL016W	COX6	P00427	148 aa		7.63	□□□□□ -1.19
SNL1	YIL016W	YOR238W	Q08634	303 aa		7.62	□□□□□ -1.19
SNL1	YIL016W	MAK21	Q12176	1025 aa	Known RBP	7.61	□□□□□ -1.19
SNL1	YIL016W	PIB1	Q06651	286 aa		7.59	□□□□□ -1.19
SNL1	YIL016W	VHR2	P40041	505 aa		7.57	□□□□□ -1.2
SNL1	YIL016W	UBP14	P38237	781 aa	Known RBP	7.52	□□□□□ -1.21
SNL1	YIL016W	YDR090C	Q03193	310 aa		7.52	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms