Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 HDLBP-216ENST00000428482 1096 ntTSL 511.38□□□□□ -0.591e-6■■□□□ 12
SFPQP23246 HDLBP-230ENST00000462130 464 ntTSL 411.31□□□□□ -0.61e-6■■□□□ 12
SFPQP23246 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.641e-6■■□□□ 12
SFPQP23246 HDLBP-211ENST00000425989 530 ntTSL 510.54□□□□□ -0.721e-6■■□□□ 12
SFPQP23246 NFATC3-209ENST00000561714 792 ntTSL 325.44■■□□□ 1.661e-10■■□□□ 12
SFPQP23246 NFATC3-210ENST00000562171 707 ntTSL 323.48■■□□□ 1.351e-10■■□□□ 12
SFPQP23246 NFATC3-219ENST00000568466 737 ntTSL 223.42■■□□□ 1.341e-10■■□□□ 12
SFPQP23246 NFATC3-206ENST00000539828 2484 ntTSL 219.53■□□□□ 0.721e-10■■□□□ 12
SFPQP23246 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.62■□□□□ 0.571e-10■■□□□ 12
SFPQP23246 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.43■□□□□ 0.221e-10■■□□□ 12
SFPQP23246 NFATC3-217ENST00000566893 715 ntTSL 213.5□□□□□ -0.251e-10■■□□□ 12
SFPQP23246 NFATC3-204ENST00000379165 3583 ntTSL 211.49□□□□□ -0.571e-10■■□□□ 12
SFPQP23246 NFATC3-213ENST00000563319 4122 ntTSL 1 (best)10.89□□□□□ -0.671e-10■■□□□ 12
SFPQP23246 NFATC3-208ENST00000553077 3870 ntTSL 210.37□□□□□ -0.751e-10■■□□□ 12
SFPQP23246 NFATC3-220ENST00000569766 3555 ntTSL 1 (best)8.45□□□□□ -1.061e-10■■□□□ 12
SFPQP23246 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.081e-10■■□□□ 12
SFPQP23246 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.11□□□□□ -1.111e-10■■□□□ 12
SFPQP23246 NFATC3-207ENST00000549350 3588 ntTSL 28.01□□□□□ -1.131e-10■■□□□ 12
SFPQP23246 NFATC3-216ENST00000566301 3840 ntTSL 1 (best)7.61□□□□□ -1.191e-10■■□□□ 12
SFPQP23246 NFATC3-211ENST00000562926 3748 ntTSL 1 (best)7.32□□□□□ -1.241e-10■■□□□ 12
SFPQP23246 NFATC3-221ENST00000570212 3181 ntTSL 1 (best)6.28□□□□□ -1.41e-10■■□□□ 12
SFPQP23246 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.14□□□□□ -1.591e-10■■□□□ 12
SFPQP23246 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.133e-6■■□□□ 12
SFPQP23246 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.973e-6■■□□□ 12
SFPQP23246 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.83e-6■■□□□ 12
SFPQP23246 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.421e-6■■□□□ 12
SFPQP23246 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.46■■□□□ 1.192e-6■■□□□ 12
SFPQP23246 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.072e-6■■□□□ 12
SFPQP23246 KANSL1-223ENST00000639150 1815 ntTSL 518.63■□□□□ 0.572e-6■■□□□ 12
SFPQP23246 KANSL1-203ENST00000571698 2276 ntTSL 517.58■□□□□ 0.42e-6■■□□□ 12
SFPQP23246 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.152e-6■■□□□ 12
SFPQP23246 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC13.52□□□□□ -0.252e-6■■□□□ 12
SFPQP23246 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.362e-6■■□□□ 12
SFPQP23246 KANSL1-217ENST00000638269 3365 ntTSL 511.83□□□□□ -0.522e-6■■□□□ 12
SFPQP23246 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.662e-6■■□□□ 12
SFPQP23246 KANSL1-226ENST00000639375 3392 ntTSL 58.84□□□□□ -0.992e-6■■□□□ 12
SFPQP23246 MAP3K2-202ENST00000409179 689 ntTSL 528.17■■■□□ 2.18e-7■■□□□ 12
SFPQP23246 DHRSX-207ENST00000478825 679 ntTSL 225.32■■□□□ 1.644e-8■■□□□ 12
SFPQP23246 DHRSX-203ENST00000430536 490 ntTSL 223.81■■□□□ 1.44e-8■■□□□ 12
SFPQP23246 PPM1H-203ENST00000548414 522 ntTSL 323.23■■□□□ 1.313e-6■■□□□ 12
SFPQP23246 DHRSX-202ENST00000412516 744 ntTSL 222.94■■□□□ 1.264e-8■■□□□ 12
SFPQP23246 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.084e-8■■□□□ 12
SFPQP23246 DHRSX-205ENST00000444280 797 ntTSL 219.19■□□□□ 0.664e-8■■□□□ 12
SFPQP23246 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.074e-7■■□□□ 12
SFPQP23246 DHRSX-204ENST00000441131 539 ntTSL 28.47□□□□□ -1.054e-8■■□□□ 12
SFPQP23246 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.918e-7■■□□□ 12
SFPQP23246 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.259e-7■■□□□ 11.9
SFPQP23246 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.589e-7■■□□□ 11.9
SFPQP23246 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.41□□□□□ -1.069e-7■■□□□ 11.9
SFPQP23246 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.59e-7■■□□□ 11.9
SFPQP23246 ASPSCR1-213ENST00000582355 1246 ntTSL 526.35■■□□□ 1.814e-10■■□□□ 11.9
SFPQP23246 RERE-211ENST00000469251 355 ntTSL 33.1□□□□□ -1.912e-7■■□□□ 11.9
SFPQP23246 RERE-218ENST00000514428 273 ntTSL 32.77□□□□□ -1.972e-7■■□□□ 11.9
SFPQP23246 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.62■■□□□ 1.854e-8■■□□□ 11.9
SFPQP23246 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.82■■□□□ 1.724e-8■■□□□ 11.9
SFPQP23246 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.47■■□□□ 1.674e-8■■□□□ 11.9
SFPQP23246 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.454e-8■■□□□ 11.9
SFPQP23246 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.224e-8■■□□□ 11.9
SFPQP23246 HMGA2-209ENST00000539662 485 ntTSL 311.88□□□□□ -0.514e-8■■□□□ 11.9
SFPQP23246 SOX5-215ENST00000545921 2589 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.552e-6■■□□□ 11.9
SFPQP23246 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC10.68□□□□□ -0.72e-6■■□□□ 11.9
SFPQP23246 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC9.65□□□□□ -0.862e-6■■□□□ 11.9
SFPQP23246 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.66□□□□□ -1.182e-6■■□□□ 11.9
SFPQP23246 SOX5-201ENST00000367206 1816 ntTSL 27.48□□□□□ -1.212e-6■■□□□ 11.9
SFPQP23246 ASPSCR1-219ENST00000584454 1919 ntTSL 1 (best)25.22■■□□□ 1.634e-8■■□□□ 11.9
SFPQP23246 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.64e-8■■□□□ 11.9
SFPQP23246 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.514e-8■■□□□ 11.9
SFPQP23246 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.28■■□□□ 1.484e-8■■□□□ 11.9
SFPQP23246 ASPSCR1-216ENST00000583503 641 ntTSL 320.01■□□□□ 0.794e-8■■□□□ 11.9
SFPQP23246 FOXP1-207ENST00000471386 299 ntTSL 1 (best)28.49■■■□□ 2.153e-6■■□□□ 11.9
SFPQP23246 FOXP1-217ENST00000498154 535 ntTSL 327.33■■□□□ 1.973e-6■■□□□ 11.9
SFPQP23246 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.91■□□□□ 0.948e-7■■□□□ 11.9
SFPQP23246 DIP2B-204ENST00000549620 2676 ntTSL 1 (best)22.12■■□□□ 1.133e-7■■□□□ 11.9
SFPQP23246 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.023e-7■■□□□ 11.9
SFPQP23246 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC13.83□□□□□ -0.28e-7■■□□□ 11.8
SFPQP23246 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.482e-9■■□□□ 11.8
SFPQP23246 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.42■■■□□ 2.462e-9■■□□□ 11.8
SFPQP23246 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.73■■■□□ 2.352e-9■■□□□ 11.8
SFPQP23246 FTCD-212ENST00000498355 1936 ntTSL 229.47■■■□□ 2.312e-9■■□□□ 11.8
SFPQP23246 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.152e-9■■□□□ 11.8
SFPQP23246 FTCD-210ENST00000488577 447 ntTSL 321.71■■□□□ 1.072e-9■■□□□ 11.8
SFPQP23246 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.431e-6■■□□□ 11.8
SFPQP23246 ANKRD11-204ENST00000378332 1982 ntTSL 223.39■■□□□ 1.331e-6■■□□□ 11.8
SFPQP23246 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.121e-6■■□□□ 11.8
SFPQP23246 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.091e-6■■□□□ 11.8
SFPQP23246 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.291e-6■■□□□ 11.8
SFPQP23246 WDR33-205ENST00000436787 822 ntTSL 515.54■□□□□ 0.081e-6■■□□□ 11.8
SFPQP23246 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC12.29□□□□□ -0.441e-6■■□□□ 11.8
SFPQP23246 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.28□□□□□ -1.247e-7■■□□□ 11.8
SFPQP23246 PVT1-211ENST00000521600 408 ntTSL 24.42□□□□□ -1.77e-7■■□□□ 11.8
SFPQP23246 PVT1-202ENST00000512617 383 ntTSL 33.46□□□□□ -1.867e-7■■□□□ 11.8
SFPQP23246 SOX5-204ENST00000441133 638 ntTSL 2 BASIC12.65□□□□□ -0.382e-6■■□□□ 11.8
SFPQP23246 SOX5-213ENST00000541847 758 ntTSL 3 BASIC9.82□□□□□ -0.842e-6■■□□□ 11.8
SFPQP23246 IGF2BP3-213ENST00000491719 800 ntTSL 523.06■■□□□ 1.284e-8■■□□□ 11.8
SFPQP23246 IGF2BP3-210ENST00000476938 500 ntTSL 217.78■□□□□ 0.444e-8■■□□□ 11.8
SFPQP23246 IGF2BP3-202ENST00000421467 2988 ntTSL 511.44□□□□□ -0.584e-8■■□□□ 11.8
SFPQP23246 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.144e-8■■□□□ 11.8
SFPQP23246 ASPSCR1-210ENST00000581608 2387 ntTSL 223.61■■□□□ 1.373e-12■■□□□ 11.8
SFPQP23246 ATXN1-209ENST00000495178 853 ntTSL 1 (best)3.72□□□□□ -1.818e-7■■□□□ 11.8
SFPQP23246 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.762e-6■■□□□ 11.8
Retrieved 100 of 4,991 protein–RNA pairs in 211.6 ms