RNA–Protein interactions for RNA: ENST00000514428.1

RERE-218, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-218ENST00000514428 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
RERE-218ENST00000514428 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
RERE-218ENST00000514428 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
RERE-218ENST00000514428 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
RERE-218ENST00000514428 FOXD1Q16676 465 aa13.78□□□□□ -0.2
RERE-218ENST00000514428 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.29
RERE-218ENST00000514428 MSH5O43196 834 aa13.18□□□□□ -0.3
RERE-218ENST00000514428 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
RERE-218ENST00000514428 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
RERE-218ENST00000514428 ADRA2BP18089 450 aa12.71□□□□□ -0.37
RERE-218ENST00000514428 PPP6R1Q9UPN7 881 aa12.71□□□□□ -0.37
RERE-218ENST00000514428 SCAF1Q9H7N4 1312 aaKnown RBP11.98□□□□□ -0.49
RERE-218ENST00000514428 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
RERE-218ENST00000514428 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
RERE-218ENST00000514428 PPP4R3CPQ6ZMV5 832 aa11.46□□□□□ -0.57
RERE-218ENST00000514428 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
RERE-218ENST00000514428 HOXD11P31277 338 aaPredicted RBP11.34□□□□□ -0.59
RERE-218ENST00000514428 DCAF8L1A6NGE4 600 aa11.29□□□□□ -0.6
RERE-218ENST00000514428 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
RERE-218ENST00000514428 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
RERE-218ENST00000514428 NCBP3Q53F19 620 aaKnown RBP11.18□□□□□ -0.62
RERE-218ENST00000514428 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
RERE-218ENST00000514428 RNF39Q9H2S5 420 aa11.1□□□□□ -0.63
RERE-218ENST00000514428 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
RERE-218ENST00000514428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.83□□□□□ -0.685e-9■□□□□ 10.5
RERE-218ENST00000514428 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
RERE-218ENST00000514428 APLP2Q06481 763 aa10.55□□□□□ -0.72
RERE-218ENST00000514428 U3KPZ7 1027 aaPredicted RBP10.49□□□□□ -0.73
RERE-218ENST00000514428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.46□□□□□ -0.73
RERE-218ENST00000514428 HNRNPUL2Q1KMD3 747 aaKnown RBP10.46□□□□□ -0.73
RERE-218ENST00000514428 KCNA4P22459 653 aa10.44□□□□□ -0.74
RERE-218ENST00000514428 CAPN15O75808 1086 aa10.41□□□□□ -0.74
RERE-218ENST00000514428 DSG3P32926 999 aa10.34□□□□□ -0.75
RERE-218ENST00000514428 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
RERE-218ENST00000514428 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
RERE-218ENST00000514428 SPINK5Q9NQ38 1064 aaPredicted RBP10.29□□□□□ -0.76
RERE-218ENST00000514428 SLC4A2P04920 1241 aa10.26□□□□□ -0.77
RERE-218ENST00000514428 TRHP20396 242 aaPredicted RBP10.19□□□□□ -0.78
RERE-218ENST00000514428 POTEHQ6S545 545 aa10.15□□□□□ -0.78
RERE-218ENST00000514428 MYCNP04198 464 aaPredicted RBP10.13□□□□□ -0.79
RERE-218ENST00000514428 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
RERE-218ENST00000514428 ABCB7O75027 752 aa10.05□□□□□ -0.8
RERE-218ENST00000514428 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
RERE-218ENST00000514428 ZBTB12Q9Y330 459 aaPredicted RBP9.94□□□□□ -0.82
RERE-218ENST00000514428 FOXD4L1Q9NU39 408 aa9.93□□□□□ -0.82
RERE-218ENST00000514428 POLA2Q14181 598 aa9.89□□□□□ -0.83
RERE-218ENST00000514428 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
RERE-218ENST00000514428 ATXN8OSP0DMR3 200 aa9.75□□□□□ -0.85
RERE-218ENST00000514428 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
RERE-218ENST00000514428 ATF5Q9Y2D1 282 aaPredicted RBP9.62□□□□□ -0.87
RERE-218ENST00000514428 FBLN2P98095 1184 aa9.59□□□□□ -0.87
RERE-218ENST00000514428 REM2Q8IYK8 340 aaPredicted RBP9.55□□□□□ -0.88
RERE-218ENST00000514428 OSCARQ8IYS5 282 aa9.55□□□□□ -0.88
RERE-218ENST00000514428 SPDYE2BA6NHP3 402 aa9.52□□□□□ -0.89
RERE-218ENST00000514428 SPDYE6P0CI01 402 aa9.52□□□□□ -0.89
RERE-218ENST00000514428 SPDYE2Q495Y8 402 aa9.52□□□□□ -0.89
RERE-218ENST00000514428 ZBTB22O15209 634 aa9.49□□□□□ -0.89
RERE-218ENST00000514428 PIP4P2Q8N4L2 257 aa9.43□□□□□ -0.9
RERE-218ENST00000514428 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
RERE-218ENST00000514428 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
RERE-218ENST00000514428 FXR2P51116 673 aaKnown RBP eCLIP9.41□□□□□ -0.9
RERE-218ENST00000514428 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
RERE-218ENST00000514428 HAX1O00165 279 aa9.34□□□□□ -0.91
RERE-218ENST00000514428 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
RERE-218ENST00000514428 SSUH2Q9Y2M2 353 aa9.29□□□□□ -0.92
RERE-218ENST00000514428 CLEC11AQ9Y240 323 aa9.26□□□□□ -0.93
RERE-218ENST00000514428 PRKAR2AP13861 404 aaKnown RBP9.22□□□□□ -0.93
RERE-218ENST00000514428 MKRN4PQ13434 485 aaPredicted RBP9.22□□□□□ -0.93
RERE-218ENST00000514428 PRR29P0C7W0 189 aa9.16□□□□□ -0.94
RERE-218ENST00000514428 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
RERE-218ENST00000514428 CLCN6P51797 869 aa9.13□□□□□ -0.95
RERE-218ENST00000514428 C19orf67A6NJJ6 358 aa9.1□□□□□ -0.95
RERE-218ENST00000514428 CSRNP3Q8WYN3 585 aa9.07□□□□□ -0.96
RERE-218ENST00000514428 STAG3Q9UJ98 1225 aa9.07□□□□□ -0.96
RERE-218ENST00000514428 EVX2Q03828 476 aa9.06□□□□□ -0.96
RERE-218ENST00000514428 CHADLQ6NUI6 762 aa8.97□□□□□ -0.97
RERE-218ENST00000514428 GABBR2O75899 941 aa8.96□□□□□ -0.98
RERE-218ENST00000514428 FARP1Q9Y4F1 1045 aaPredicted RBP8.96□□□□□ -0.98
RERE-218ENST00000514428 CD44P16070 742 aaKnown RBP8.94□□□□□ -0.98
RERE-218ENST00000514428 SPDYE4A6NLX3 237 aa8.89□□□□□ -0.99
RERE-218ENST00000514428 PAK3O75914 559 aaPredicted RBP8.88□□□□□ -0.99
RERE-218ENST00000514428 EHMT2Q96KQ7 1210 aa8.88□□□□□ -0.99
RERE-218ENST00000514428 NPM1P06748 294 aaKnown RBP eCLIP8.85□□□□□ -0.99
RERE-218ENST00000514428 LHX8Q68G74 356 aa8.83□□□□□ -1
RERE-218ENST00000514428 ZNF579Q8NAF0 562 aaKnown RBP8.83□□□□□ -1
RERE-218ENST00000514428 DCBLD2Q96PD2 775 aa8.81□□□□□ -1
RERE-218ENST00000514428 CREBZFQ9NS37 354 aa8.79□□□□□ -1
RERE-218ENST00000514428 ZRANB1Q9UGI0 708 aa8.78□□□□□ -1
RERE-218ENST00000514428 PLEKHG5O94827 1062 aa8.73□□□□□ -1.01
RERE-218ENST00000514428 POTEIP0CG38 1075 aa8.66□□□□□ -1.02
RERE-218ENST00000514428 PROM2Q8N271 834 aa8.64□□□□□ -1.03
RERE-218ENST00000514428 GALR2O43603 387 aaPredicted RBP8.6□□□□□ -1.03
RERE-218ENST00000514428 MNX1P50219 401 aaPredicted RBP8.6□□□□□ -1.03
RERE-218ENST00000514428 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
RERE-218ENST00000514428 PHF12Q96QT6 1004 aa8.55□□□□□ -1.04
RERE-218ENST00000514428 SLC39A7Q92504 469 aa8.54□□□□□ -1.04
RERE-218ENST00000514428 C7P10643 843 aa8.53□□□□□ -1.04
RERE-218ENST00000514428 MAMSTRQ6ZN01 415 aa8.53□□□□□ -1.04
RERE-218ENST00000514428 ASTLQ6HA08 431 aaPredicted RBP8.52□□□□□ -1.05
RERE-218ENST00000514428 MIER1Q8N108 512 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms