Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 AC244015.2-201ENST00000616358 1861 ntBASIC19.2■□□□□ 0.66
SHISA3A0PJX4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 AC004448.1-201ENST00000458332 883 ntBASIC19.2■□□□□ 0.66
SHISA3A0PJX4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.2■□□□□ 0.66
SHISA3A0PJX4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 AF106564.1-201ENST00000607058 2553 ntBASIC19.19■□□□□ 0.66
SHISA3A0PJX4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.19■□□□□ 0.66
SHISA3A0PJX4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHISA3A0PJX4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.18■□□□□ 0.66
SHISA3A0PJX4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHISA3A0PJX4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHISA3A0PJX4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHISA3A0PJX4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHISA3A0PJX4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHISA3A0PJX4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHISA3A0PJX4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHISA3A0PJX4 LINC01960-201ENST00000563759 1884 ntBASIC19.16■□□□□ 0.66
SHISA3A0PJX4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHISA3A0PJX4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHISA3A0PJX4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHISA3A0PJX4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHISA3A0PJX4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHISA3A0PJX4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHISA3A0PJX4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.15■□□□□ 0.66
SHISA3A0PJX4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHISA3A0PJX4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHISA3A0PJX4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SHISA3A0PJX4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms