Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV16A0A0A6YYK6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV16A0A0A6YYK6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV16A0A0A6YYK6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV16A0A0A6YYK6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV16A0A0A6YYK6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV16A0A0A6YYK6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV16A0A0A6YYK6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.24■□□□□ 0.03
TRAV16A0A0A6YYK6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV16A0A0A6YYK6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV16A0A0A6YYK6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV16A0A0A6YYK6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV16A0A0A6YYK6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV16A0A0A6YYK6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV16A0A0A6YYK6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV16A0A0A6YYK6 AC090877.2-201ENST00000558441 1738 ntBASIC15.23■□□□□ 0.03
TRAV16A0A0A6YYK6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV16A0A0A6YYK6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV16A0A0A6YYK6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV16A0A0A6YYK6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV16A0A0A6YYK6 KRT8P33-201ENST00000508125 1423 ntBASIC15.23■□□□□ 0.03
TRAV16A0A0A6YYK6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRAV16A0A0A6YYK6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 AC092667.1-201ENST00000434301 2586 ntBASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV16A0A0A6YYK6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 KRT18P24-201ENST00000344739 1156 ntBASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV16A0A0A6YYK6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV16A0A0A6YYK6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV16A0A0A6YYK6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV16A0A0A6YYK6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV16A0A0A6YYK6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms