Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV26-1A0A087WT03 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV26-1A0A087WT03 C17orf82-201ENST00000623772 1530 ntBASIC15.77■□□□□ 0.11
TRAV26-1A0A087WT03 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.77■□□□□ 0.11
TRAV26-1A0A087WT03 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV26-1A0A087WT03 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
TRAV26-1A0A087WT03 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV26-1A0A087WT03 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV26-1A0A087WT03 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV26-1A0A087WT03 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 PKD1P6-201ENST00000343738 4769 ntBASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV26-1A0A087WT03 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV26-1A0A087WT03 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 AC092171.4-201ENST00000609130 632 ntBASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 AC241377.3-202ENST00000626088 1088 ntBASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 AC241585.3-202ENST00000628937 1088 ntBASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 AC245100.8-202ENST00000629247 1058 ntBASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 AC079630.1-202ENST00000618127 1840 ntBASIC15.73■□□□□ 0.11
TRAV26-1A0A087WT03 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 AC144652.1-201ENST00000609974 1624 ntBASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 AC099791.2-201ENST00000605725 427 ntBASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV26-1A0A087WT03 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms