Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC11.73□□□□□ -0.53
APOC1P02654 AC137723.2-201ENST00000623540 398 ntBASIC11.73□□□□□ -0.53
APOC1P02654 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
APOC1P02654 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
APOC1P02654 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.73□□□□□ -0.53
APOC1P02654 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC1P02654 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 SRL-202ENST00000537996 1814 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
APOC1P02654 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC11.72□□□□□ -0.53
APOC1P02654 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
APOC1P02654 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
APOC1P02654 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC11.72□□□□□ -0.53
APOC1P02654 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 OR7E115P-201ENST00000382617 1024 ntBASIC11.72□□□□□ -0.53
APOC1P02654 RN7SKP109-201ENST00000410592 316 ntBASIC11.72□□□□□ -0.53
APOC1P02654 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.72□□□□□ -0.53
APOC1P02654 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC11.72□□□□□ -0.53
APOC1P02654 FGFR3P5-201ENST00000564496 886 ntBASIC11.72□□□□□ -0.53
APOC1P02654 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC11.72□□□□□ -0.53
APOC1P02654 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
APOC1P02654 CSTP2-201ENST00000610599 398 ntBASIC11.72□□□□□ -0.53
APOC1P02654 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC11.72□□□□□ -0.53
APOC1P02654 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
APOC1P02654 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC1P02654 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
APOC1P02654 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC1P02654 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
APOC1P02654 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 STX16-202ENST00000355957 4897 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC1P02654 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC1P02654 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC11.71□□□□□ -0.53
APOC1P02654 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC11.71□□□□□ -0.53
APOC1P02654 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
APOC1P02654 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
APOC1P02654 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
APOC1P02654 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
APOC1P02654 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
APOC1P02654 AC091181.1-201ENST00000623762 2098 ntBASIC11.71□□□□□ -0.53
APOC1P02654 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
APOC1P02654 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC1P02654 NTM-206ENST00000427481 2583 ntTSL 5 BASIC11.71□□□□□ -0.53
APOC1P02654 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC1P02654 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC11.71□□□□□ -0.53
APOC1P02654 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
APOC1P02654 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC1P02654 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC11.71□□□□□ -0.53
APOC1P02654 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC1P02654 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms