Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1DP48730 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CSNK1DP48730 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CSNK1DP48730 PCDHB18P-202ENST00000526308 3197 ntBASIC13.09□□□□□ -0.31
CSNK1DP48730 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1DP48730 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1DP48730 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1DP48730 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.09□□□□□ -0.31
CSNK1DP48730 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1DP48730 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
CSNK1DP48730 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CSNK1DP48730 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CSNK1DP48730 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC13.08□□□□□ -0.31
CSNK1DP48730 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CSNK1DP48730 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CSNK1DP48730 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CSNK1DP48730 AP000346.2-202ENST00000425948 383 ntBASIC13.08□□□□□ -0.32
CSNK1DP48730 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 AC003958.1-201ENST00000435883 421 ntBASIC13.08□□□□□ -0.32
CSNK1DP48730 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 AC098934.2-202ENST00000438944 1033 ntBASIC13.08□□□□□ -0.32
CSNK1DP48730 AC010997.1-201ENST00000447646 350 ntBASIC13.08□□□□□ -0.32
CSNK1DP48730 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 RN7SL646P-201ENST00000492969 297 ntBASIC13.08□□□□□ -0.32
CSNK1DP48730 AC147876.1-201ENST00000504408 322 ntBASIC13.08□□□□□ -0.32
CSNK1DP48730 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC13.08□□□□□ -0.32
CSNK1DP48730 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
CSNK1DP48730 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1DP48730 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 PKMP1-201ENST00000455804 1523 ntBASIC13.08□□□□□ -0.32
CSNK1DP48730 AC015813.5-201ENST00000624641 1514 ntBASIC13.08□□□□□ -0.32
CSNK1DP48730 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1DP48730 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1DP48730 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1DP48730 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1DP48730 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CSNK1DP48730 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CSNK1DP48730 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1DP48730 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1DP48730 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1DP48730 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
CSNK1DP48730 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1DP48730 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1DP48730 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1DP48730 AL356585.2-201ENST00000625078 2396 ntBASIC13.07□□□□□ -0.32
CSNK1DP48730 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CSNK1DP48730 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1DP48730 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1DP48730 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1DP48730 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1DP48730 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1DP48730 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1DP48730 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CSNK1DP48730 AL157823.1-201ENST00000403727 628 ntBASIC13.07□□□□□ -0.32
CSNK1DP48730 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC13.07□□□□□ -0.32
CSNK1DP48730 AP000343.1-201ENST00000440602 385 ntBASIC13.07□□□□□ -0.32
CSNK1DP48730 AC099328.1-201ENST00000498809 1030 ntBASIC13.07□□□□□ -0.32
CSNK1DP48730 RN7SKP195-201ENST00000516587 303 ntBASIC13.07□□□□□ -0.32
CSNK1DP48730 AC080023.2-201ENST00000532615 208 ntBASIC13.07□□□□□ -0.32
CSNK1DP48730 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
CSNK1DP48730 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC13.07□□□□□ -0.32
CSNK1DP48730 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms