RNA–Protein interactions for RNA: ENST00000356082.8

LAMB3-201, Transcript of laminin subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB3, Length 4,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB3-201ENST00000356082 NISCHQ9Y2I1 1504 aa26.99■■□□□ 1.91
LAMB3-201ENST00000356082 DCAF8L2P0C7V8 631 aa24.36■■□□□ 1.49
LAMB3-201ENST00000356082 SHROOM4Q9ULL8 1493 aa23.58■■□□□ 1.37
LAMB3-201ENST00000356082 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
LAMB3-201ENST00000356082 CCDC180Q9P1Z9 1646 aa22.87■■□□□ 1.25
LAMB3-201ENST00000356082 ABCC9O60706 1549 aa22.61■■□□□ 1.21
LAMB3-201ENST00000356082 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
LAMB3-201ENST00000356082 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
LAMB3-201ENST00000356082 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
LAMB3-201ENST00000356082 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
LAMB3-201ENST00000356082 NACADO15069 1562 aa21.7■■□□□ 1.06
LAMB3-201ENST00000356082 EHMT2Q96KQ7 1210 aa21.65■■□□□ 1.06
LAMB3-201ENST00000356082 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
LAMB3-201ENST00000356082 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
LAMB3-201ENST00000356082 FAM9AQ8IZU1 332 aaPredicted RBP21.61■■□□□ 1.05
LAMB3-201ENST00000356082 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
LAMB3-201ENST00000356082 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
LAMB3-201ENST00000356082 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
LAMB3-201ENST00000356082 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
LAMB3-201ENST00000356082 LOC105371045A0A1W2PR82 267 aa21.12■□□□□ 0.97
LAMB3-201ENST00000356082 UBTFP17480 764 aaKnown RBP20.98■□□□□ 0.95
LAMB3-201ENST00000356082 BAZ1AQ9NRL2 1556 aaPredicted RBP20.96■□□□□ 0.95
LAMB3-201ENST00000356082 PCGF6Q9BYE7 350 aa20.92■□□□□ 0.94
LAMB3-201ENST00000356082 MROH2BQ7Z745 1585 aa20.92■□□□□ 0.94
LAMB3-201ENST00000356082 RANGAP1P46060 587 aaPredicted RBP20.89■□□□□ 0.93
LAMB3-201ENST00000356082 APLP2Q06481 763 aa20.83■□□□□ 0.92
LAMB3-201ENST00000356082 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
LAMB3-201ENST00000356082 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
LAMB3-201ENST00000356082 WIZO95785 1651 aa20.67■□□□□ 0.9
LAMB3-201ENST00000356082 PPARGC1BQ86YN6 1023 aaKnown RBP20.62■□□□□ 0.89
LAMB3-201ENST00000356082 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
LAMB3-201ENST00000356082 CSRNP3Q8WYN3 585 aa20.53■□□□□ 0.88
LAMB3-201ENST00000356082 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.87
LAMB3-201ENST00000356082 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
LAMB3-201ENST00000356082 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
LAMB3-201ENST00000356082 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
LAMB3-201ENST00000356082 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
LAMB3-201ENST00000356082 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
LAMB3-201ENST00000356082 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
LAMB3-201ENST00000356082 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.85
LAMB3-201ENST00000356082 ABCC8Q09428 1581 aa20.24■□□□□ 0.83
LAMB3-201ENST00000356082 UNC13AQ9UPW8 1703 aa20.24■□□□□ 0.83
LAMB3-201ENST00000356082 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
LAMB3-201ENST00000356082 EEA1Q15075 1411 aa20.18■□□□□ 0.82
LAMB3-201ENST00000356082 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
LAMB3-201ENST00000356082 ZEB1P37275 1124 aaPredicted RBP20.14■□□□□ 0.82
LAMB3-201ENST00000356082 SOGA1O94964 1423 aa20.11■□□□□ 0.81
LAMB3-201ENST00000356082 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
LAMB3-201ENST00000356082 HRCP23327 699 aa20.09■□□□□ 0.81
LAMB3-201ENST00000356082 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
LAMB3-201ENST00000356082 CADPSQ9ULU8 1353 aa20.01■□□□□ 0.79
LAMB3-201ENST00000356082 GOLGA3Q08378 1498 aa20■□□□□ 0.79
LAMB3-201ENST00000356082 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
LAMB3-201ENST00000356082 P3H3Q8IVL6 736 aa19.97■□□□□ 0.79
LAMB3-201ENST00000356082 ITGAEP38570 1179 aa19.96■□□□□ 0.79
LAMB3-201ENST00000356082 CEP162Q5TB80 1403 aa19.95■□□□□ 0.78
LAMB3-201ENST00000356082 TNIKQ9UKE5 1360 aa19.94■□□□□ 0.78
LAMB3-201ENST00000356082 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
LAMB3-201ENST00000356082 FBLN2P98095 1184 aa19.93■□□□□ 0.78
LAMB3-201ENST00000356082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
LAMB3-201ENST00000356082 CLIP1P30622 1438 aa19.91■□□□□ 0.78
LAMB3-201ENST00000356082 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
LAMB3-201ENST00000356082 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
LAMB3-201ENST00000356082 CUX2O14529 1486 aa19.84■□□□□ 0.77
LAMB3-201ENST00000356082 CC2D2AQ9P2K1 1620 aa19.82■□□□□ 0.76
LAMB3-201ENST00000356082 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
LAMB3-201ENST00000356082 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
LAMB3-201ENST00000356082 FANCD2Q9BXW9 1451 aa19.75■□□□□ 0.75
LAMB3-201ENST00000356082 CFTRP13569 1480 aa19.75■□□□□ 0.75
LAMB3-201ENST00000356082 FAM50AQ14320 339 aaKnown RBP19.73■□□□□ 0.75
LAMB3-201ENST00000356082 CARMIL1Q5VZK9 1371 aa19.72■□□□□ 0.75
LAMB3-201ENST00000356082 ERCC6Q03468 1493 aa19.72■□□□□ 0.75
LAMB3-201ENST00000356082 SYNJ1O43426 1573 aa19.65■□□□□ 0.74
LAMB3-201ENST00000356082 ARID3CA6NKF2 412 aa19.65■□□□□ 0.74
LAMB3-201ENST00000356082 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
LAMB3-201ENST00000356082 CHMP7Q8WUX9 453 aaPredicted RBP19.62■□□□□ 0.73
LAMB3-201ENST00000356082 RAPGEF2Q9Y4G8 1499 aa19.62■□□□□ 0.73
LAMB3-201ENST00000356082 NESP48681 1621 aa19.58■□□□□ 0.73
LAMB3-201ENST00000356082 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
LAMB3-201ENST00000356082 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
LAMB3-201ENST00000356082 TOP2BQ02880 1626 aa19.5■□□□□ 0.71
LAMB3-201ENST00000356082 VPS8Q8N3P4 1428 aa19.5■□□□□ 0.71
LAMB3-201ENST00000356082 CUX1P39880 1505 aa19.5■□□□□ 0.71
LAMB3-201ENST00000356082 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
LAMB3-201ENST00000356082 IGF1RP08069 1367 aa19.47■□□□□ 0.71
LAMB3-201ENST00000356082 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
LAMB3-201ENST00000356082 MTUS2Q5JR59 1369 aa19.42■□□□□ 0.7
LAMB3-201ENST00000356082 FHAD1B1AJZ9 1412 aa19.37■□□□□ 0.69
LAMB3-201ENST00000356082 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
LAMB3-201ENST00000356082 TRIM52Q96A61 297 aa19.33■□□□□ 0.69
LAMB3-201ENST00000356082 KIF21BO75037 1637 aa19.33■□□□□ 0.69
LAMB3-201ENST00000356082 MYT1LQ9UL68 1186 aa19.32■□□□□ 0.68
LAMB3-201ENST00000356082 KANK4Q5T7N3 995 aaPredicted RBP19.32■□□□□ 0.68
LAMB3-201ENST00000356082 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
LAMB3-201ENST00000356082 POLA1P09884 1462 aaPredicted RBP19.31■□□□□ 0.68
LAMB3-201ENST00000356082 LAMC3Q9Y6N6 1575 aa19.31■□□□□ 0.68
LAMB3-201ENST00000356082 ZNF777Q9ULD5 760 aaPredicted RBP19.29■□□□□ 0.68
LAMB3-201ENST00000356082 PRXQ9BXM0 1461 aa19.29■□□□□ 0.68
LAMB3-201ENST00000356082 NEUROD1Q13562 356 aa19.29■□□□□ 0.68
LAMB3-201ENST00000356082 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms