Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 MIR1908-201ENST00000410394 80 ntBASIC10.72□□□□□ -0.69
RAB40CQ96S21 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 AC005740.2-201ENST00000511085 419 ntBASIC10.72□□□□□ -0.69
RAB40CQ96S21 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 AC126915.1-201ENST00000522847 1038 ntBASIC10.72□□□□□ -0.69
RAB40CQ96S21 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 ABBA01031663.1-201ENST00000635630 790 ntBASIC10.72□□□□□ -0.69
RAB40CQ96S21 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 FRMPD2B-201ENST00000431305 1347 ntBASIC10.72□□□□□ -0.69
RAB40CQ96S21 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 GBAP1-208ENST00000566701 1546 ntBASIC10.72□□□□□ -0.69
RAB40CQ96S21 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 AC009533.1-201ENST00000539757 3158 ntBASIC10.72□□□□□ -0.69
RAB40CQ96S21 AL157832.2-205ENST00000597245 1649 ntBASIC10.72□□□□□ -0.69
RAB40CQ96S21 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 EME1-201ENST00000338165 2339 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 ALOX15P2-201ENST00000340858 1897 ntBASIC10.71□□□□□ -0.69
RAB40CQ96S21 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 MBP-201ENST00000354542 575 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 SAT1-201ENST00000379251 801 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 SAT1-202ENST00000379253 909 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 SAT1-203ENST00000379254 868 ntTSL 3 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 RPL3P2-204ENST00000413027 1203 ntBASIC10.71□□□□□ -0.69
RAB40CQ96S21 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 PFN2-202ENST00000423691 911 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AC092573.1-201ENST00000433054 884 ntBASIC10.71□□□□□ -0.69
RAB40CQ96S21 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 SERPINA13P-202ENST00000478994 924 ntBASIC10.71□□□□□ -0.69
RAB40CQ96S21 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 PDXDC2P-206ENST00000534700 1315 ntBASIC10.71□□□□□ -0.69
RAB40CQ96S21 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms