Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHL1O00533 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHL1O00533 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHL1O00533 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHL1O00533 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHL1O00533 PAX6-217ENST00000481563 1587 ntTSL 5 BASIC16.64■□□□□ 0.25
CHL1O00533 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHL1O00533 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC16.63■□□□□ 0.25
CHL1O00533 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC16.63■□□□□ 0.25
CHL1O00533 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC16.63■□□□□ 0.25
CHL1O00533 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CHL1O00533 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC16.63■□□□□ 0.25
CHL1O00533 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC16.63■□□□□ 0.25
CHL1O00533 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC16.63■□□□□ 0.25
CHL1O00533 AC064836.1-201ENST00000405197 704 ntBASIC16.63■□□□□ 0.25
CHL1O00533 CYP2F2P-201ENST00000437853 1056 ntBASIC16.63■□□□□ 0.25
CHL1O00533 AC008267.3-201ENST00000448776 712 ntBASIC16.63■□□□□ 0.25
CHL1O00533 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHL1O00533 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC16.63■□□□□ 0.25
CHL1O00533 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC16.63■□□□□ 0.25
CHL1O00533 AL589743.3-201ENST00000604121 517 ntBASIC16.63■□□□□ 0.25
CHL1O00533 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC16.63■□□□□ 0.25
CHL1O00533 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHL1O00533 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.63■□□□□ 0.25
CHL1O00533 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC16.63■□□□□ 0.25
CHL1O00533 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC16.63■□□□□ 0.25
CHL1O00533 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHL1O00533 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC16.63■□□□□ 0.25
CHL1O00533 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHL1O00533 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 COL6A4P2-202ENST00000504443 2753 ntBASIC16.62■□□□□ 0.25
CHL1O00533 AC118758.2-201ENST00000614242 2813 ntBASIC16.62■□□□□ 0.25
CHL1O00533 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC16.62■□□□□ 0.25
CHL1O00533 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CHL1O00533 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 AC092284.1-201ENST00000511386 1289 ntBASIC16.62■□□□□ 0.25
CHL1O00533 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC16.62■□□□□ 0.25
CHL1O00533 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.62■□□□□ 0.25
CHL1O00533 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC16.62■□□□□ 0.25
CHL1O00533 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC16.62■□□□□ 0.25
CHL1O00533 PRKN-210ENST00000612540 603 ntTSL 5 BASIC16.62■□□□□ 0.25
CHL1O00533 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC16.62■□□□□ 0.25
CHL1O00533 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.62■□□□□ 0.25
CHL1O00533 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC16.62■□□□□ 0.25
CHL1O00533 AP000897.1-201ENST00000584036 1613 ntBASIC16.62■□□□□ 0.25
CHL1O00533 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC16.62■□□□□ 0.25
CHL1O00533 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CHL1O00533 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHL1O00533 PCDHA5-203ENST00000614258 4248 ntBASIC16.62■□□□□ 0.25
CHL1O00533 SMUG1-AS1-201ENST00000634796 1734 ntTSL 5 BASIC16.62■□□□□ 0.25
CHL1O00533 AL031590.1-202ENST00000641466 1737 ntBASIC16.62■□□□□ 0.25
CHL1O00533 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHL1O00533 CTAGE10P-201ENST00000318353 2408 ntBASIC16.61■□□□□ 0.25
CHL1O00533 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHL1O00533 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms