Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 PCDHB19P-202ENST00000625133 2914 ntBASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 AL031587.5-201ENST00000624344 1849 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 HSD3BP1-201ENST00000286193 1111 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 RN7SKP255-201ENST00000363442 313 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 RN7SKP203-201ENST00000363618 332 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 RN7SKP71-201ENST00000364558 318 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 7SK.1-201ENST00000365328 331 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 IQCF4-203ENST00000428561 420 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 RBM14-205ENST00000443702 732 ntTSL 3 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 RNU1-80P-201ENST00000459500 161 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 HNRNPA3P6-201ENST00000472163 1006 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 RPS18P9-201ENST00000482817 460 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 SRP14-208ENST00000560773 468 ntTSL 3 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 AP001120.3-201ENST00000585729 489 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 PRMT1P1-201ENST00000604252 1009 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 AL591424.3-201ENST00000614278 872 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 AC244097.1-201ENST00000621631 1216 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 ENPP7P8-202ENST00000527856 1345 ntBASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPA3F8WFD2 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 AC091807.1-201ENST00000418838 1544 ntBASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPA3F8WFD2 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AC008536.3-201ENST00000623282 1599 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms