Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC084855.2-201ENST00000559400 2393 ntTSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 PIGCP1-201ENST00000527583 895 ntBASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 AL132994.2-201ENST00000603120 687 ntBASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 AC068338.3-201ENST00000617892 418 ntBASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 AL033527.4-201ENST00000641026 673 ntBASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 OACYLP-201ENST00000417918 2208 ntBASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ANKRD20A4-201ENST00000357336 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 AC015909.3-201ENST00000572855 1794 ntBASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 AC133919.3-201ENST00000621407 1804 ntBASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 DTX2P1-201ENST00000425797 1633 ntBASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 FAM47DP-201ENST00000402340 3290 ntBASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 AC135506.1-201ENST00000603877 1799 ntBASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 KRT17P5-201ENST00000332088 839 ntBASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 BUD31-205ENST00000456893 512 ntTSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 AC004923.1-202ENST00000642106 209 ntBASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 AS3MT-201ENST00000369880 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 LIF-201ENST00000249075 3969 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms