Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AC092115.1-201ENST00000566277 1402 ntBASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 FAM90A17P-201ENST00000533716 1957 ntBASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 ORAOV1P1-201ENST00000503108 395 ntBASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AL008721.1-201ENST00000609964 604 ntBASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 LINC00643-207ENST00000637212 734 ntBASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AL139823.1-201ENST00000641871 1225 ntBASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AC120114.4-201ENST00000623731 2194 ntBASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 DNM1P41-201ENST00000623634 3350 ntBASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
POLR2J2Q9GZM3 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 RNVU1-8-201ENST00000364272 125 ntBASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 GUSBP10-201ENST00000417412 665 ntBASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 CALR4P-201ENST00000431943 946 ntBASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 NDUFS6P1-201ENST00000485187 316 ntBASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 NUP210P1-202ENST00000504322 710 ntBASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 AC100858.1-201ENST00000514059 1228 ntBASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 AP001120.3-201ENST00000585729 489 ntBASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 AL132642.2-201ENST00000623423 1998 ntBASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
POLR2J2Q9GZM3 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms