Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
LRRC42Q9Y546 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC42Q9Y546 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC42Q9Y546 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC42Q9Y546 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.82■□□□□ 0.92
LRRC42Q9Y546 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
LRRC42Q9Y546 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC42Q9Y546 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
LRRC42Q9Y546 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC42Q9Y546 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 FEM1AP4-201ENST00000443167 1987 ntBASIC20.81■□□□□ 0.92
LRRC42Q9Y546 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LRRC42Q9Y546 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.8■□□□□ 0.92
LRRC42Q9Y546 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC42Q9Y546 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC42Q9Y546 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC42Q9Y546 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC42Q9Y546 DUX4L29-201ENST00000425409 679 ntBASIC20.8■□□□□ 0.92
LRRC42Q9Y546 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC42Q9Y546 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 AL020996.1-203ENST00000536896 2307 ntBASIC20.79■□□□□ 0.92
LRRC42Q9Y546 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRC42Q9Y546 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC42Q9Y546 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRC42Q9Y546 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC42Q9Y546 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.77■□□□□ 0.92
LRRC42Q9Y546 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC42Q9Y546 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC42Q9Y546 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC42Q9Y546 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.77■□□□□ 0.91
LRRC42Q9Y546 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.76■□□□□ 0.91
LRRC42Q9Y546 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC42Q9Y546 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC42Q9Y546 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRC42Q9Y546 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC42Q9Y546 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC42Q9Y546 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
LRRC42Q9Y546 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC42Q9Y546 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC42Q9Y546 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms