Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 AC093787.1-201ENST00000450396 207 ntBASIC9.32□□□□□ -0.92
MACF1Q9UPN3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 MYC-209ENST00000641252 345 ntBASIC9.31□□□□□ -0.92
MACF1Q9UPN3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 CNN2P6-201ENST00000439038 900 ntBASIC9.31□□□□□ -0.92
MACF1Q9UPN3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MACF1Q9UPN3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 TESC-206ENST00000541210 936 ntTSL 3 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
MACF1Q9UPN3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 AL049597.2-201ENST00000565575 961 ntBASIC9.29□□□□□ -0.92
MACF1Q9UPN3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC9.29□□□□□ -0.92
MACF1Q9UPN3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 ST7-AS1-201ENST00000456775 1889 ntBASIC9.28□□□□□ -0.92
MACF1Q9UPN3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MACF1Q9UPN3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms