Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL1Q9NR64 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL1Q9NR64 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 AC027682.1-201ENST00000562846 899 ntBASIC20.62■□□□□ 0.89
KLHL1Q9NR64 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 AC079834.2-201ENST00000609776 1949 ntBASIC20.62■□□□□ 0.89
KLHL1Q9NR64 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL1Q9NR64 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 RASA4CP-201ENST00000424092 1398 ntBASIC20.61■□□□□ 0.89
KLHL1Q9NR64 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 AC099791.1-201ENST00000416440 715 ntBASIC20.61■□□□□ 0.89
KLHL1Q9NR64 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 pRNA.6-201ENST00000610482 90 ntBASIC20.61■□□□□ 0.89
KLHL1Q9NR64 pRNA.5-201ENST00000612139 90 ntBASIC20.61■□□□□ 0.89
KLHL1Q9NR64 pRNA.11-201ENST00000618423 90 ntBASIC20.61■□□□□ 0.89
KLHL1Q9NR64 pRNA.13-201ENST00000619112 90 ntBASIC20.61■□□□□ 0.89
KLHL1Q9NR64 AC136469.2-201ENST00000623944 1028 ntBASIC20.61■□□□□ 0.89
KLHL1Q9NR64 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KLHL1Q9NR64 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHL1Q9NR64 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KLHL1Q9NR64 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
KLHL1Q9NR64 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KLHL1Q9NR64 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.58■□□□□ 0.89
KLHL1Q9NR64 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.58■□□□□ 0.88
KLHL1Q9NR64 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KLHL1Q9NR64 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KLHL1Q9NR64 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KLHL1Q9NR64 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.57■□□□□ 0.88
KLHL1Q9NR64 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KLHL1Q9NR64 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 C9orf163-202ENST00000624034 2573 ntBASIC20.56■□□□□ 0.88
KLHL1Q9NR64 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms