Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 AC006455.2-201ENST00000429931 906 ntBASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 AC079630.1-202ENST00000618127 1840 ntBASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 AC110285.6-201ENST00000617652 491 ntBASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 AC241377.3-202ENST00000626088 1088 ntBASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 AC241585.3-202ENST00000628937 1088 ntBASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 AC245100.8-202ENST00000629247 1058 ntBASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.03■□□□□ 0.96
NECTIN3Q9NQS3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 UNC93B3-201ENST00000308076 687 ntBASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 AC144652.1-201ENST00000609974 1624 ntBASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN3Q9NQS3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NECTIN3Q9NQS3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 AC009086.3-201ENST00000623486 1008 ntBASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 AC137767.1-201ENST00000602918 1920 ntBASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECTIN3Q9NQS3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 AC092171.4-201ENST00000609130 632 ntBASIC21■□□□□ 0.95
NECTIN3Q9NQS3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21■□□□□ 0.95
NECTIN3Q9NQS3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 AL139246.5-201ENST00000606645 996 ntBASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN3Q9NQS3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 FP325331.1-202ENST00000623531 1380 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms