Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SNX25Q9H3E2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
SNX25Q9H3E2 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.55■■□□□ 1.36
SNX25Q9H3E2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.55■■□□□ 1.36
SNX25Q9H3E2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SNX25Q9H3E2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.55■■□□□ 1.36
SNX25Q9H3E2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
SNX25Q9H3E2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.54■■□□□ 1.36
SNX25Q9H3E2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX25Q9H3E2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX25Q9H3E2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX25Q9H3E2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SNX25Q9H3E2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.54■■□□□ 1.36
SNX25Q9H3E2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX25Q9H3E2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.54■■□□□ 1.36
SNX25Q9H3E2 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.54■■□□□ 1.36
SNX25Q9H3E2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNX25Q9H3E2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 AC105265.2-201ENST00000467189 838 ntBASIC23.53■■□□□ 1.36
SNX25Q9H3E2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNX25Q9H3E2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SNX25Q9H3E2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNX25Q9H3E2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNX25Q9H3E2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNX25Q9H3E2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.52■■□□□ 1.36
SNX25Q9H3E2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SNX25Q9H3E2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.52■■□□□ 1.36
SNX25Q9H3E2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SNX25Q9H3E2 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.52■■□□□ 1.36
SNX25Q9H3E2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SNX25Q9H3E2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.35
SNX25Q9H3E2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
SNX25Q9H3E2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.51■■□□□ 1.35
SNX25Q9H3E2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNX25Q9H3E2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.51■■□□□ 1.35
SNX25Q9H3E2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNX25Q9H3E2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
SNX25Q9H3E2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
SNX25Q9H3E2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SNX25Q9H3E2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.5■■□□□ 1.35
SNX25Q9H3E2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.5■■□□□ 1.35
SNX25Q9H3E2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.5■■□□□ 1.35
SNX25Q9H3E2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
SNX25Q9H3E2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.5■■□□□ 1.35
SNX25Q9H3E2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 DUSP8P5-201ENST00000422884 1815 ntBASIC23.49■■□□□ 1.35
SNX25Q9H3E2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNX25Q9H3E2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNX25Q9H3E2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SNX25Q9H3E2 ZNRF2P3-201ENST00000424200 374 ntBASIC23.47■■□□□ 1.35
SNX25Q9H3E2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.47■■□□□ 1.35
SNX25Q9H3E2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.47■■□□□ 1.35
SNX25Q9H3E2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.47■■□□□ 1.35
SNX25Q9H3E2 AP005435.1-201ENST00000529293 1178 ntBASIC23.47■■□□□ 1.35
SNX25Q9H3E2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.47■■□□□ 1.35
SNX25Q9H3E2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
SNX25Q9H3E2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SNX25Q9H3E2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SNX25Q9H3E2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SNX25Q9H3E2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNX25Q9H3E2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.46■■□□□ 1.35
SNX25Q9H3E2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SNX25Q9H3E2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SNX25Q9H3E2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.46■■□□□ 1.35
SNX25Q9H3E2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.46■■□□□ 1.35
SNX25Q9H3E2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.46■■□□□ 1.35
SNX25Q9H3E2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SNX25Q9H3E2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.46■■□□□ 1.35
SNX25Q9H3E2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms