Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HPS1Q92902 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.95■□□□□ 0.78
HPS1Q92902 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS1Q92902 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.95■□□□□ 0.78
HPS1Q92902 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS1Q92902 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HPS1Q92902 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HPS1Q92902 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS1Q92902 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HPS1Q92902 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.94■□□□□ 0.78
HPS1Q92902 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.94■□□□□ 0.78
HPS1Q92902 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.94■□□□□ 0.78
HPS1Q92902 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS1Q92902 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS1Q92902 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HPS1Q92902 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HPS1Q92902 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HPS1Q92902 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS1Q92902 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS1Q92902 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.93■□□□□ 0.78
HPS1Q92902 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HPS1Q92902 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HPS1Q92902 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.93■□□□□ 0.78
HPS1Q92902 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HPS1Q92902 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.93■□□□□ 0.78
HPS1Q92902 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.93■□□□□ 0.78
HPS1Q92902 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS1Q92902 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS1Q92902 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS1Q92902 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
HPS1Q92902 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS1Q92902 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HPS1Q92902 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS1Q92902 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HPS1Q92902 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS1Q92902 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
HPS1Q92902 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS1Q92902 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS1Q92902 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HPS1Q92902 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HPS1Q92902 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS1Q92902 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS1Q92902 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HPS1Q92902 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS1Q92902 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS1Q92902 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS1Q92902 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS1Q92902 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HPS1Q92902 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.91■□□□□ 0.78
HPS1Q92902 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS1Q92902 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS1Q92902 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS1Q92902 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS1Q92902 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
HPS1Q92902 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HPS1Q92902 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS1Q92902 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.91■□□□□ 0.78
HPS1Q92902 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.91■□□□□ 0.78
HPS1Q92902 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS1Q92902 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS1Q92902 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS1Q92902 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.9■□□□□ 0.78
HPS1Q92902 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS1Q92902 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS1Q92902 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HPS1Q92902 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS1Q92902 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.9■□□□□ 0.78
HPS1Q92902 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.9■□□□□ 0.78
HPS1Q92902 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HPS1Q92902 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HPS1Q92902 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.9■□□□□ 0.78
HPS1Q92902 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.9■□□□□ 0.78
HPS1Q92902 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.9■□□□□ 0.78
HPS1Q92902 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HPS1Q92902 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS1Q92902 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HPS1Q92902 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS1Q92902 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.89■□□□□ 0.77
HPS1Q92902 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS1Q92902 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS1Q92902 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS1Q92902 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS1Q92902 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HPS1Q92902 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.89■□□□□ 0.77
HPS1Q92902 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.89■□□□□ 0.77
HPS1Q92902 AF106564.1-201ENST00000607058 2553 ntBASIC19.89■□□□□ 0.77
HPS1Q92902 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HPS1Q92902 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS1Q92902 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS1Q92902 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HPS1Q92902 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS1Q92902 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS1Q92902 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.88■□□□□ 0.77
HPS1Q92902 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
HPS1Q92902 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HPS1Q92902 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HPS1Q92902 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS1Q92902 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS1Q92902 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HPS1Q92902 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms