Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC29.32■■■□□ 2.28
CCDC146Q8IYE0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCDC146Q8IYE0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
CCDC146Q8IYE0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCDC146Q8IYE0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC29.32■■■□□ 2.28
CCDC146Q8IYE0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.32■■■□□ 2.28
CCDC146Q8IYE0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC29.32■■■□□ 2.28
CCDC146Q8IYE0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 AL138724.1-201ENST00000606771 1088 ntBASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 AC011298.3-201ENST00000615796 283 ntBASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 AC106739.1-201ENST00000617035 715 ntBASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 AC136469.2-201ENST00000623944 1028 ntBASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC146Q8IYE0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC29.3■■■□□ 2.28
CCDC146Q8IYE0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCDC146Q8IYE0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC29.3■■■□□ 2.28
CCDC146Q8IYE0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CCDC146Q8IYE0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.3■■■□□ 2.28
CCDC146Q8IYE0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC29.3■■■□□ 2.28
CCDC146Q8IYE0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
CCDC146Q8IYE0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCDC146Q8IYE0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC29.29■■■□□ 2.28
CCDC146Q8IYE0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC29.29■■■□□ 2.28
CCDC146Q8IYE0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.29■■■□□ 2.28
CCDC146Q8IYE0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC29.29■■■□□ 2.28
CCDC146Q8IYE0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC29.29■■■□□ 2.28
CCDC146Q8IYE0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC29.28■■■□□ 2.28
CCDC146Q8IYE0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC146Q8IYE0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC146Q8IYE0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC146Q8IYE0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.28■■■□□ 2.28
CCDC146Q8IYE0 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.28■■■□□ 2.28
CCDC146Q8IYE0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC146Q8IYE0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
CCDC146Q8IYE0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
CCDC146Q8IYE0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC146Q8IYE0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CCDC146Q8IYE0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC29.27■■■□□ 2.28
CCDC146Q8IYE0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CCDC146Q8IYE0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
CCDC146Q8IYE0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
CCDC146Q8IYE0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC29.26■■■□□ 2.28
CCDC146Q8IYE0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.28
CCDC146Q8IYE0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCDC146Q8IYE0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCDC146Q8IYE0 SLC47A1P1-202ENST00000449666 945 ntBASIC29.26■■■□□ 2.27
CCDC146Q8IYE0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.26■■■□□ 2.27
CCDC146Q8IYE0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.26■■■□□ 2.27
CCDC146Q8IYE0 AL031432.3-201ENST00000607698 485 ntBASIC29.26■■■□□ 2.27
CCDC146Q8IYE0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CCDC146Q8IYE0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCDC146Q8IYE0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC146Q8IYE0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
CCDC146Q8IYE0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC146Q8IYE0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
CCDC146Q8IYE0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC146Q8IYE0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC29.25■■■□□ 2.27
CCDC146Q8IYE0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC146Q8IYE0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CCDC146Q8IYE0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CCDC146Q8IYE0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CCDC146Q8IYE0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC29.24■■■□□ 2.27
CCDC146Q8IYE0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC29.24■■■□□ 2.27
CCDC146Q8IYE0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CCDC146Q8IYE0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC146Q8IYE0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC146Q8IYE0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC146Q8IYE0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC146Q8IYE0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC146Q8IYE0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC146Q8IYE0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC29.23■■■□□ 2.27
CCDC146Q8IYE0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CCDC146Q8IYE0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC29.22■■■□□ 2.27
CCDC146Q8IYE0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CCDC146Q8IYE0 MIR638-201ENST00000385237 100 ntBASIC29.22■■■□□ 2.27
CCDC146Q8IYE0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.22■■■□□ 2.27
CCDC146Q8IYE0 GRAMD4P4-201ENST00000613563 1115 ntBASIC29.22■■■□□ 2.27
CCDC146Q8IYE0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CCDC146Q8IYE0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CCDC146Q8IYE0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
CCDC146Q8IYE0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC29.21■■■□□ 2.27
CCDC146Q8IYE0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC29.21■■■□□ 2.27
CCDC146Q8IYE0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC29.21■■■□□ 2.27
CCDC146Q8IYE0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC29.21■■■□□ 2.27
CCDC146Q8IYE0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC29.21■■■□□ 2.27
CCDC146Q8IYE0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CCDC146Q8IYE0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CCDC146Q8IYE0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.2■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms