Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.38■□□□□ 0.69
LYSMD2Q8IV50 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 MIR3648-2-201ENST00000581792 180 ntBASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 MIR3648-1-201ENST00000615959 180 ntBASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD2Q8IV50 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD2Q8IV50 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD2Q8IV50 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LYSMD2Q8IV50 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD2Q8IV50 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD2Q8IV50 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD2Q8IV50 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
LYSMD2Q8IV50 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD2Q8IV50 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.34■□□□□ 0.69
LYSMD2Q8IV50 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD2Q8IV50 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD2Q8IV50 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD2Q8IV50 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LYSMD2Q8IV50 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD2Q8IV50 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LYSMD2Q8IV50 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD2Q8IV50 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LYSMD2Q8IV50 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LYSMD2Q8IV50 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LYSMD2Q8IV50 RP9P-202ENST00000450133 1212 ntBASIC19.33■□□□□ 0.68
LYSMD2Q8IV50 AC092296.2-201ENST00000589470 999 ntBASIC19.33■□□□□ 0.68
LYSMD2Q8IV50 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.33■□□□□ 0.68
LYSMD2Q8IV50 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.33■□□□□ 0.68
LYSMD2Q8IV50 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD2Q8IV50 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD2Q8IV50 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
LYSMD2Q8IV50 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD2Q8IV50 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD2Q8IV50 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD2Q8IV50 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD2Q8IV50 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 AC093536.1-201ENST00000569153 554 ntBASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms