Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
SEL1L3Q68CR1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SEL1L3Q68CR1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.43■■□□□ 1.18
SEL1L3Q68CR1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.43■■□□□ 1.18
SEL1L3Q68CR1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.43■■□□□ 1.18
SEL1L3Q68CR1 AL117328.2-201ENST00000624617 1940 ntBASIC22.43■■□□□ 1.18
SEL1L3Q68CR1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SEL1L3Q68CR1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.43■■□□□ 1.18
SEL1L3Q68CR1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SEL1L3Q68CR1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SEL1L3Q68CR1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SEL1L3Q68CR1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.42■■□□□ 1.18
SEL1L3Q68CR1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.42■■□□□ 1.18
SEL1L3Q68CR1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.42■■□□□ 1.18
SEL1L3Q68CR1 CA15P2-201ENST00000611168 834 ntBASIC22.42■■□□□ 1.18
SEL1L3Q68CR1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SEL1L3Q68CR1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SEL1L3Q68CR1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 AC027682.1-201ENST00000562846 899 ntBASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SEL1L3Q68CR1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 RASA4CP-201ENST00000424092 1398 ntBASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 AC099791.1-201ENST00000416440 715 ntBASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 ANOS2P-203ENST00000472227 1816 ntBASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
SEL1L3Q68CR1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.18
SEL1L3Q68CR1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SEL1L3Q68CR1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SEL1L3Q68CR1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SEL1L3Q68CR1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
SEL1L3Q68CR1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SEL1L3Q68CR1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SEL1L3Q68CR1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
SEL1L3Q68CR1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SEL1L3Q68CR1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
SEL1L3Q68CR1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SEL1L3Q68CR1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.37■■□□□ 1.17
SEL1L3Q68CR1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 AC233723.2-201ENST00000623798 2106 ntBASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SEL1L3Q68CR1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms