Protein–RNA interactions for Protein: Q5VXH4

PRAMEF6, PRAME family member 6, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF6Q5VXH4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 SERBP1P1-201ENST00000396021 1160 ntBASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 MIR3181-201ENST00000578512 73 ntBASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 AC004687.1-201ENST00000579003 1625 ntBASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF6Q5VXH4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF6Q5VXH4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PRAMEF6Q5VXH4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF6Q5VXH4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.79■□□□□ 0.6
PRAMEF6Q5VXH4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF6Q5VXH4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF6Q5VXH4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 AL499627.2-201ENST00000606283 725 ntBASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF6Q5VXH4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 UNC93B3-201ENST00000308076 687 ntBASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 AC096631.2-201ENST00000436136 790 ntBASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 DUX4L19-201ENST00000557448 1267 ntBASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PRAMEF6Q5VXH4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.77■□□□□ 0.59
PRAMEF6Q5VXH4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF6Q5VXH4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PRAMEF6Q5VXH4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 AC133637.1-201ENST00000624115 1537 ntBASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF6Q5VXH4 AC133561.1-201ENST00000568600 2415 ntBASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 AC068473.5-201ENST00000616428 2072 ntBASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF6Q5VXH4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF6Q5VXH4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PRAMEF6Q5VXH4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF6Q5VXH4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF6Q5VXH4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF6Q5VXH4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF6Q5VXH4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF6Q5VXH4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF6Q5VXH4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms