Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM3P40198 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM3P40198 SERBP1P1-201ENST00000396021 1160 ntBASIC17.95■□□□□ 0.46
CEACAM3P40198 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.95■□□□□ 0.46
CEACAM3P40198 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.95■□□□□ 0.46
CEACAM3P40198 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM3P40198 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM3P40198 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM3P40198 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.94■□□□□ 0.46
CEACAM3P40198 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CEACAM3P40198 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CEACAM3P40198 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 AC096631.2-201ENST00000436136 790 ntBASIC17.94■□□□□ 0.46
CEACAM3P40198 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.94■□□□□ 0.46
CEACAM3P40198 AL136162.1-201ENST00000607711 1078 ntBASIC17.94■□□□□ 0.46
CEACAM3P40198 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.94■□□□□ 0.46
CEACAM3P40198 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.94■□□□□ 0.46
CEACAM3P40198 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CEACAM3P40198 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.93■□□□□ 0.46
CEACAM3P40198 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CEACAM3P40198 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CEACAM3P40198 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CEACAM3P40198 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CEACAM3P40198 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CEACAM3P40198 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CEACAM3P40198 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.93■□□□□ 0.46
CEACAM3P40198 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CEACAM3P40198 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.93■□□□□ 0.46
CEACAM3P40198 AC136469.2-201ENST00000623944 1028 ntBASIC17.93■□□□□ 0.46
CEACAM3P40198 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.93■□□□□ 0.46
CEACAM3P40198 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CEACAM3P40198 AC135279.3-201ENST00000610945 1311 ntBASIC17.93■□□□□ 0.46
CEACAM3P40198 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CEACAM3P40198 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CEACAM3P40198 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.93■□□□□ 0.46
CEACAM3P40198 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CEACAM3P40198 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CEACAM3P40198 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CEACAM3P40198 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CEACAM3P40198 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CEACAM3P40198 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CEACAM3P40198 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.92■□□□□ 0.46
CEACAM3P40198 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CEACAM3P40198 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.92■□□□□ 0.46
CEACAM3P40198 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.92■□□□□ 0.46
CEACAM3P40198 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CEACAM3P40198 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.92■□□□□ 0.46
CEACAM3P40198 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.92■□□□□ 0.46
CEACAM3P40198 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.92■□□□□ 0.46
CEACAM3P40198 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CEACAM3P40198 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CEACAM3P40198 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEACAM3P40198 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CEACAM3P40198 AC004687.1-201ENST00000579003 1625 ntBASIC17.91■□□□□ 0.46
CEACAM3P40198 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEACAM3P40198 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CEACAM3P40198 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.91■□□□□ 0.46
CEACAM3P40198 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.91■□□□□ 0.46
CEACAM3P40198 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.91■□□□□ 0.46
CEACAM3P40198 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.91■□□□□ 0.46
CEACAM3P40198 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEACAM3P40198 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.91■□□□□ 0.46
CEACAM3P40198 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.91■□□□□ 0.46
CEACAM3P40198 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.91■□□□□ 0.46
CEACAM3P40198 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CEACAM3P40198 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEACAM3P40198 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEACAM3P40198 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEACAM3P40198 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.91■□□□□ 0.46
CEACAM3P40198 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CEACAM3P40198 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CEACAM3P40198 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CEACAM3P40198 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEACAM3P40198 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.9■□□□□ 0.46
CEACAM3P40198 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CEACAM3P40198 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEACAM3P40198 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.9■□□□□ 0.46
CEACAM3P40198 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEACAM3P40198 PBX2P1-201ENST00000493219 1291 ntBASIC17.9■□□□□ 0.46
CEACAM3P40198 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEACAM3P40198 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.9■□□□□ 0.46
CEACAM3P40198 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.9■□□□□ 0.46
CEACAM3P40198 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEACAM3P40198 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CEACAM3P40198 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CEACAM3P40198 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEACAM3P40198 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CEACAM3P40198 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEACAM3P40198 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms