Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC123595.1-201ENST00000440769 1046 ntBASIC21.64■■□□□ 1.05
TNFP01375 AC105233.4-201ENST00000642045 216 ntBASIC21.64■■□□□ 1.05
TNFP01375 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFP01375 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFP01375 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFP01375 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFP01375 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.63■■□□□ 1.05
TNFP01375 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TNFP01375 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.63■■□□□ 1.05
TNFP01375 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.63■■□□□ 1.05
TNFP01375 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.63■■□□□ 1.05
TNFP01375 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
TNFP01375 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFP01375 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFP01375 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFP01375 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFP01375 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TNFP01375 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.62■■□□□ 1.05
TNFP01375 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.62■■□□□ 1.05
TNFP01375 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFP01375 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TNFP01375 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TNFP01375 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFP01375 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.62■■□□□ 1.05
TNFP01375 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNFP01375 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.61■■□□□ 1.05
TNFP01375 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.61■■□□□ 1.05
TNFP01375 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.61■■□□□ 1.05
TNFP01375 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.61■■□□□ 1.05
TNFP01375 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.61■■□□□ 1.05
TNFP01375 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNFP01375 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.61■■□□□ 1.05
TNFP01375 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNFP01375 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.61■■□□□ 1.05
TNFP01375 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNFP01375 AC087239.1-201ENST00000622671 572 ntBASIC21.61■■□□□ 1.05
TNFP01375 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.61■■□□□ 1.05
TNFP01375 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFP01375 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TNFP01375 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TNFP01375 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.61■■□□□ 1.05
TNFP01375 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFP01375 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFP01375 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFP01375 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TNFP01375 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TNFP01375 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.6■■□□□ 1.05
TNFP01375 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.6■■□□□ 1.05
TNFP01375 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFP01375 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.6■■□□□ 1.05
TNFP01375 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.6■■□□□ 1.05
TNFP01375 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
TNFP01375 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFP01375 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.6■■□□□ 1.05
TNFP01375 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.6■■□□□ 1.05
TNFP01375 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.6■■□□□ 1.05
TNFP01375 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFP01375 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.59■■□□□ 1.05
TNFP01375 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.59■■□□□ 1.05
TNFP01375 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFP01375 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFP01375 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.59■■□□□ 1.05
TNFP01375 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFP01375 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.59■■□□□ 1.05
TNFP01375 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TNFP01375 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFP01375 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.59■■□□□ 1.05
TNFP01375 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.59■■□□□ 1.05
TNFP01375 AL031602.1-201ENST00000633169 911 ntBASIC21.59■■□□□ 1.05
TNFP01375 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFP01375 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFP01375 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFP01375 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TNFP01375 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.58■■□□□ 1.05
TNFP01375 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.58■■□□□ 1.05
TNFP01375 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFP01375 ANOS2P-203ENST00000472227 1816 ntBASIC21.58■■□□□ 1.05
TNFP01375 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.58■■□□□ 1.05
TNFP01375 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
TNFP01375 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.58■■□□□ 1.05
TNFP01375 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.58■■□□□ 1.05
TNFP01375 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.58■■□□□ 1.05
TNFP01375 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TNFP01375 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TNFP01375 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.58■■□□□ 1.04
TNFP01375 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.58■■□□□ 1.04
TNFP01375 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TNFP01375 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TNFP01375 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFP01375 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.57■■□□□ 1.04
TNFP01375 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFP01375 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFP01375 AC010141.3-201ENST00000456659 717 ntBASIC21.57■■□□□ 1.04
TNFP01375 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.57■■□□□ 1.04
TNFP01375 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.57■■□□□ 1.04
TNFP01375 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFP01375 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFP01375 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.57■■□□□ 1.04
TNFP01375 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFP01375 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms