Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CLPTM1O96005 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.72■□□□□ 0.91
CLPTM1O96005 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.72■□□□□ 0.91
CLPTM1O96005 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1O96005 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
CLPTM1O96005 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1O96005 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.72■□□□□ 0.91
CLPTM1O96005 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1O96005 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLPTM1O96005 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1O96005 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1O96005 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1O96005 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1O96005 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1O96005 TSPY13P-201ENST00000338964 914 ntBASIC20.71■□□□□ 0.91
CLPTM1O96005 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.71■□□□□ 0.91
CLPTM1O96005 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLPTM1O96005 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CLPTM1O96005 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLPTM1O96005 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1O96005 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1O96005 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLPTM1O96005 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1O96005 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
CLPTM1O96005 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.7■□□□□ 0.91
CLPTM1O96005 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CLPTM1O96005 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1O96005 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.7■□□□□ 0.9
CLPTM1O96005 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1O96005 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1O96005 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1O96005 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.69■□□□□ 0.9
CLPTM1O96005 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.69■□□□□ 0.9
CLPTM1O96005 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.69■□□□□ 0.9
CLPTM1O96005 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.69■□□□□ 0.9
CLPTM1O96005 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 AC005229.4-201ENST00000610085 2198 ntBASIC20.69■□□□□ 0.9
CLPTM1O96005 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CLPTM1O96005 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1O96005 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
CLPTM1O96005 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.69■□□□□ 0.9
CLPTM1O96005 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1O96005 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1O96005 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CLPTM1O96005 AC018755.3-202ENST00000596210 929 ntBASIC20.68■□□□□ 0.9
CLPTM1O96005 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.68■□□□□ 0.9
CLPTM1O96005 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CLPTM1O96005 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLPTM1O96005 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.68■□□□□ 0.9
CLPTM1O96005 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CLPTM1O96005 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CLPTM1O96005 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
CLPTM1O96005 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.67■□□□□ 0.9
CLPTM1O96005 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.67■□□□□ 0.9
CLPTM1O96005 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1O96005 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLPTM1O96005 MIR6765-201ENST00000614092 87 ntBASIC20.66■□□□□ 0.9
CLPTM1O96005 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1O96005 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1O96005 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CLPTM1O96005 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1O96005 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1O96005 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPTM1O96005 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLPTM1O96005 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPTM1O96005 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPTM1O96005 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CLPTM1O96005 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.65■□□□□ 0.9
CLPTM1O96005 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPTM1O96005 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPTM1O96005 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.65■□□□□ 0.9
CLPTM1O96005 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPTM1O96005 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPTM1O96005 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLPTM1O96005 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
CLPTM1O96005 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLPTM1O96005 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.64■□□□□ 0.9
CLPTM1O96005 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
CLPTM1O96005 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms