Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE3O75131 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE3O75131 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE3O75131 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE3O75131 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE3O75131 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE3O75131 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPNE3O75131 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CPNE3O75131 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE3O75131 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE3O75131 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE3O75131 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.08■□□□□ 0.97
CPNE3O75131 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE3O75131 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CPNE3O75131 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE3O75131 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE3O75131 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE3O75131 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.08■□□□□ 0.97
CPNE3O75131 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE3O75131 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.08■□□□□ 0.97
CPNE3O75131 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE3O75131 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CPNE3O75131 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPNE3O75131 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.08■□□□□ 0.96
CPNE3O75131 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE3O75131 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.07■□□□□ 0.96
CPNE3O75131 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.07■□□□□ 0.96
CPNE3O75131 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE3O75131 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE3O75131 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE3O75131 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE3O75131 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.07■□□□□ 0.96
CPNE3O75131 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE3O75131 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE3O75131 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE3O75131 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE3O75131 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.06■□□□□ 0.96
CPNE3O75131 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CPNE3O75131 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CPNE3O75131 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CPNE3O75131 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.06■□□□□ 0.96
CPNE3O75131 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
CPNE3O75131 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CPNE3O75131 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CPNE3O75131 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CPNE3O75131 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE3O75131 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE3O75131 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.05■□□□□ 0.96
CPNE3O75131 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE3O75131 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE3O75131 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE3O75131 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE3O75131 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.05■□□□□ 0.96
CPNE3O75131 AC010525.1-201ENST00000585559 441 ntBASIC21.05■□□□□ 0.96
CPNE3O75131 AL358852.1-201ENST00000623174 1268 ntBASIC21.05■□□□□ 0.96
CPNE3O75131 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE3O75131 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE3O75131 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE3O75131 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE3O75131 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE3O75131 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE3O75131 MIR572-201ENST00000384983 95 ntBASIC21.04■□□□□ 0.96
CPNE3O75131 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.04■□□□□ 0.96
CPNE3O75131 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.04■□□□□ 0.96
CPNE3O75131 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.04■□□□□ 0.96
CPNE3O75131 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CPNE3O75131 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE3O75131 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CPNE3O75131 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE3O75131 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE3O75131 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE3O75131 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE3O75131 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CPNE3O75131 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE3O75131 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE3O75131 YBX1P1-201ENST00000445822 960 ntBASIC21.03■□□□□ 0.96
CPNE3O75131 AL162430.1-201ENST00000480705 870 ntBASIC21.03■□□□□ 0.96
CPNE3O75131 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE3O75131 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE3O75131 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE3O75131 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE3O75131 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE3O75131 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.02■□□□□ 0.96
CPNE3O75131 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE3O75131 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE3O75131 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CPNE3O75131 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE3O75131 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE3O75131 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms