Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 SNORD23-201ENST00000408876 110 ntBASIC11.44□□□□□ -0.58
NICN1Q9BSH3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 AC004898.1-201ENST00000451057 766 ntBASIC11.44□□□□□ -0.58
NICN1Q9BSH3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 CD44-224ENST00000526669 870 ntTSL 5 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 AC012073.1-201ENST00000606114 1108 ntBASIC11.44□□□□□ -0.58
NICN1Q9BSH3 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 DDC-206ENST00000431062 1620 ntTSL 5 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 ODCP-201ENST00000459650 1639 ntBASIC11.44□□□□□ -0.58
NICN1Q9BSH3 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NICN1Q9BSH3 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 KRT18P40-201ENST00000599859 1571 ntBASIC11.43□□□□□ -0.58
NICN1Q9BSH3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 AC016700.1-201ENST00000429424 312 ntBASIC11.43□□□□□ -0.58
NICN1Q9BSH3 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 AC073150.1-201ENST00000450406 1084 ntBASIC11.43□□□□□ -0.58
NICN1Q9BSH3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 IQSEC3P1-201ENST00000538799 536 ntBASIC11.43□□□□□ -0.58
NICN1Q9BSH3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 SIGLEC22P-201ENST00000599104 714 ntBASIC11.43□□□□□ -0.58
NICN1Q9BSH3 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 AC092171.5-201ENST00000608012 942 ntBASIC11.43□□□□□ -0.58
NICN1Q9BSH3 AC011491.1-203ENST00000637688 543 ntBASIC11.43□□□□□ -0.58
NICN1Q9BSH3 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 AC009549.1-201ENST00000603468 1686 ntBASIC11.43□□□□□ -0.58
NICN1Q9BSH3 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NICN1Q9BSH3 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms