RNA–Protein interactions for RNA: ENST00000253807.2

PCDHAC1-201, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHAC1, Length 5,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-201ENST00000253807 NISCHQ9Y2I1 1504 aa21.78■■□□□ 1.08
PCDHAC1-201ENST00000253807 DCAF8L2P0C7V8 631 aa21.62■■□□□ 1.05
PCDHAC1-201ENST00000253807 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
PCDHAC1-201ENST00000253807 SHROOM4Q9ULL8 1493 aa20.49■□□□□ 0.87
PCDHAC1-201ENST00000253807 EHMT2Q96KQ7 1210 aa19.73■□□□□ 0.75
PCDHAC1-201ENST00000253807 APLP2Q06481 763 aa19.48■□□□□ 0.71
PCDHAC1-201ENST00000253807 FAM9AQ8IZU1 332 aaPredicted RBP19.46■□□□□ 0.71
PCDHAC1-201ENST00000253807 PCGF6Q9BYE7 350 aa19.33■□□□□ 0.68
PCDHAC1-201ENST00000253807 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
PCDHAC1-201ENST00000253807 PELP1Q8IZL8 1130 aaKnown RBP19.09■□□□□ 0.65
PCDHAC1-201ENST00000253807 TTBK1Q5TCY1 1321 aaPredicted RBP19.08■□□□□ 0.64
PCDHAC1-201ENST00000253807 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.64
PCDHAC1-201ENST00000253807 UBTFP17480 764 aaKnown RBP18.94■□□□□ 0.62
PCDHAC1-201ENST00000253807 RANGAP1P46060 587 aaPredicted RBP18.92■□□□□ 0.62
PCDHAC1-201ENST00000253807 CCER1Q8TC90 406 aaPredicted RBP18.9■□□□□ 0.62
PCDHAC1-201ENST00000253807 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
PCDHAC1-201ENST00000253807 CENPBP07199 599 aaPredicted RBP18.74■□□□□ 0.59
PCDHAC1-201ENST00000253807 ATP1B4Q9UN42 357 aaPredicted RBP18.72■□□□□ 0.59
PCDHAC1-201ENST00000253807 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
PCDHAC1-201ENST00000253807 LOC105371045A0A1W2PR82 267 aa18.57■□□□□ 0.56
PCDHAC1-201ENST00000253807 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
PCDHAC1-201ENST00000253807 HRCP23327 699 aa18.52■□□□□ 0.56
PCDHAC1-201ENST00000253807 ABCC9O60706 1549 aa18.4■□□□□ 0.54
PCDHAC1-201ENST00000253807 YTHDC1Q96MU7 727 aaKnown RBP18.27■□□□□ 0.51
PCDHAC1-201ENST00000253807 NEFLP07196 543 aa18.23■□□□□ 0.51
PCDHAC1-201ENST00000253807 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
PCDHAC1-201ENST00000253807 ITGAEP38570 1179 aa18.2■□□□□ 0.5
PCDHAC1-201ENST00000253807 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.5
PCDHAC1-201ENST00000253807 ERICH6Q7L0X2 663 aa18.16■□□□□ 0.5
PCDHAC1-201ENST00000253807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
PCDHAC1-201ENST00000253807 ZCCHC6Q5VYS8 1495 aaKnown RBP18.1■□□□□ 0.49
PCDHAC1-201ENST00000253807 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
PCDHAC1-201ENST00000253807 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.45
PCDHAC1-201ENST00000253807 MYT1LQ9UL68 1186 aa17.86■□□□□ 0.45
PCDHAC1-201ENST00000253807 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
PCDHAC1-201ENST00000253807 CSRNP3Q8WYN3 585 aa17.84■□□□□ 0.45
PCDHAC1-201ENST00000253807 POLR3GLQ9BT43 218 aa17.84■□□□□ 0.45
PCDHAC1-201ENST00000253807 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
PCDHAC1-201ENST00000253807 MYT1Q01538 1121 aa17.81■□□□□ 0.44
PCDHAC1-201ENST00000253807 TRIM52Q96A61 297 aa17.68■□□□□ 0.42
PCDHAC1-201ENST00000253807 NEUROD1Q13562 356 aa17.64■□□□□ 0.41
PCDHAC1-201ENST00000253807 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
PCDHAC1-201ENST00000253807 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
PCDHAC1-201ENST00000253807 ZNF316A6NFI3 1004 aaPredicted RBP17.59■□□□□ 0.41
PCDHAC1-201ENST00000253807 P3H3Q8IVL6 736 aa17.52■□□□□ 0.39
PCDHAC1-201ENST00000253807 DAXXQ9UER7 740 aaPredicted RBP17.51■□□□□ 0.39
PCDHAC1-201ENST00000253807 FBLN2P98095 1184 aa17.49■□□□□ 0.39
PCDHAC1-201ENST00000253807 ANP32CO43423 234 aa17.49■□□□□ 0.39
PCDHAC1-201ENST00000253807 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
PCDHAC1-201ENST00000253807 RB1CC1Q8TDY2 1594 aa17.43■□□□□ 0.38
PCDHAC1-201ENST00000253807 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
PCDHAC1-201ENST00000253807 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
PCDHAC1-201ENST00000253807 ZNF326Q5BKZ1 582 aaKnown RBP17.38■□□□□ 0.37
PCDHAC1-201ENST00000253807 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
PCDHAC1-201ENST00000253807 NACADO15069 1562 aa17.36■□□□□ 0.37
PCDHAC1-201ENST00000253807 ARID3CA6NKF2 412 aa17.33■□□□□ 0.36
PCDHAC1-201ENST00000253807 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
PCDHAC1-201ENST00000253807 EEA1Q15075 1411 aa17.29■□□□□ 0.36
PCDHAC1-201ENST00000253807 MYO15BQ96JP2 1530 aa17.28■□□□□ 0.36
PCDHAC1-201ENST00000253807 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
PCDHAC1-201ENST00000253807 BCANQ96GW7 911 aa17.24■□□□□ 0.35
PCDHAC1-201ENST00000253807 CLIP1P30622 1438 aa17.24■□□□□ 0.35
PCDHAC1-201ENST00000253807 CLSPNQ9HAW4 1339 aa17.23■□□□□ 0.35
PCDHAC1-201ENST00000253807 TONSLQ96HA7 1378 aa17.21■□□□□ 0.35
PCDHAC1-201ENST00000253807 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
PCDHAC1-201ENST00000253807 RTL5Q5HYW3 569 aaPredicted RBP17.16■□□□□ 0.34
PCDHAC1-201ENST00000253807 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
PCDHAC1-201ENST00000253807 CEP162Q5TB80 1403 aa17.15■□□□□ 0.34
PCDHAC1-201ENST00000253807 BAZ1BQ9UIG0 1483 aaKnown RBP17.11■□□□□ 0.33
PCDHAC1-201ENST00000253807 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
PCDHAC1-201ENST00000253807 MTUS2Q5JR59 1369 aa17.09■□□□□ 0.33
PCDHAC1-201ENST00000253807 TNIKQ9UKE5 1360 aa17.09■□□□□ 0.33
PCDHAC1-201ENST00000253807 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
PCDHAC1-201ENST00000253807 CHIC2Q9UKJ5 165 aa17.04■□□□□ 0.32
PCDHAC1-201ENST00000253807 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
PCDHAC1-201ENST00000253807 CECR2Q9BXF3 1484 aa17.03■□□□□ 0.32
PCDHAC1-201ENST00000253807 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
PCDHAC1-201ENST00000253807 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
PCDHAC1-201ENST00000253807 TSPY4P0CV99 314 aa16.96■□□□□ 0.31
PCDHAC1-201ENST00000253807 TSPY10P0CW01 314 aa16.96■□□□□ 0.31
PCDHAC1-201ENST00000253807 CANXP27824 592 aaKnown RBP16.96■□□□□ 0.31
PCDHAC1-201ENST00000253807 NEFMP07197 916 aa16.96■□□□□ 0.3
PCDHAC1-201ENST00000253807 HNRNPUQ00839 825 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCDHAC1-201ENST00000253807 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
PCDHAC1-201ENST00000253807 FKBP8Q14318 412 aa16.92■□□□□ 0.3
PCDHAC1-201ENST00000253807 NPM1P06748 294 aaKnown RBP eCLIP16.92■□□□□ 0.3
PCDHAC1-201ENST00000253807 MIER1Q8N108 512 aa16.89■□□□□ 0.29
PCDHAC1-201ENST00000253807 FAM9BQ8IZU0 186 aa16.88■□□□□ 0.29
PCDHAC1-201ENST00000253807 CHGAP10645 457 aaKnown RBP16.85■□□□□ 0.29
PCDHAC1-201ENST00000253807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
PCDHAC1-201ENST00000253807 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
PCDHAC1-201ENST00000253807 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
PCDHAC1-201ENST00000253807 ANP32AP39687 249 aaKnown RBP16.84■□□□□ 0.29
PCDHAC1-201ENST00000253807 EIF4G2P78344 907 aaKnown RBP eCLIP16.83■□□□□ 0.28
PCDHAC1-201ENST00000253807 TMC1Q8TDI8 760 aa16.82■□□□□ 0.28
PCDHAC1-201ENST00000253807 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
PCDHAC1-201ENST00000253807 SOGA1O94964 1423 aa16.81■□□□□ 0.28
PCDHAC1-201ENST00000253807 PLEKHD1A6NEE1 506 aa16.8■□□□□ 0.28
PCDHAC1-201ENST00000253807 MRS2Q9HD23 443 aa16.79■□□□□ 0.28
PCDHAC1-201ENST00000253807 KDM2AQ9Y2K7 1162 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms