Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
MMP13P45452 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.83□□□□□ -0.19
MMP13P45452 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
MMP13P45452 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
MMP13P45452 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
MMP13P45452 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
MMP13P45452 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC13.83□□□□□ -0.19
MMP13P45452 DNM1P41-201ENST00000623634 3350 ntBASIC13.83□□□□□ -0.19
MMP13P45452 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC13.83□□□□□ -0.19
MMP13P45452 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC13.83□□□□□ -0.2
MMP13P45452 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC13.83□□□□□ -0.2
MMP13P45452 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.83□□□□□ -0.2
MMP13P45452 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC13.83□□□□□ -0.2
MMP13P45452 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.83□□□□□ -0.2
MMP13P45452 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC13.83□□□□□ -0.2
MMP13P45452 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.83□□□□□ -0.2
MMP13P45452 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.83□□□□□ -0.2
MMP13P45452 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 AP003398.1-201ENST00000531124 318 ntBASIC13.83□□□□□ -0.2
MMP13P45452 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.83□□□□□ -0.2
MMP13P45452 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.83□□□□□ -0.2
MMP13P45452 AC010503.4-201ENST00000615487 688 ntBASIC13.83□□□□□ -0.2
MMP13P45452 AC026120.2-201ENST00000617239 309 ntBASIC13.83□□□□□ -0.2
MMP13P45452 AC002044.2-201ENST00000624910 970 ntBASIC13.83□□□□□ -0.2
MMP13P45452 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.83□□□□□ -0.2
MMP13P45452 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.83□□□□□ -0.2
MMP13P45452 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.83□□□□□ -0.2
MMP13P45452 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.83□□□□□ -0.2
MMP13P45452 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.83□□□□□ -0.2
MMP13P45452 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 AC126564.1-201ENST00000623628 2013 ntBASIC13.83□□□□□ -0.2
MMP13P45452 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC13.83□□□□□ -0.2
MMP13P45452 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MMP13P45452 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC13.83□□□□□ -0.2
MMP13P45452 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC13.83□□□□□ -0.2
MMP13P45452 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC13.83□□□□□ -0.2
MMP13P45452 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
MMP13P45452 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
MMP13P45452 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
MMP13P45452 NBPF17P-201ENST00000401087 2119 ntBASIC13.82□□□□□ -0.2
MMP13P45452 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 AC080013.1-204ENST00000607426 2185 ntBASIC13.82□□□□□ -0.2
MMP13P45452 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 GBP1P1-201ENST00000394662 1740 ntBASIC13.82□□□□□ -0.2
MMP13P45452 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.82□□□□□ -0.2
MMP13P45452 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 RPSAP31-201ENST00000416648 895 ntBASIC13.82□□□□□ -0.2
MMP13P45452 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13.82□□□□□ -0.2
MMP13P45452 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.82□□□□□ -0.2
MMP13P45452 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.82□□□□□ -0.2
MMP13P45452 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.82□□□□□ -0.2
MMP13P45452 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC13.82□□□□□ -0.2
MMP13P45452 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.82□□□□□ -0.2
MMP13P45452 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
MMP13P45452 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
MMP13P45452 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms