Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC13.86□□□□□ -0.19
MMP13P45452 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC13.85□□□□□ -0.19
MMP13P45452 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
MMP13P45452 AL365181.1-201ENST00000564032 1828 ntBASIC13.85□□□□□ -0.19
MMP13P45452 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC13.85□□□□□ -0.19
MMP13P45452 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 CICP2-201ENST00000420675 2328 ntBASIC13.85□□□□□ -0.19
MMP13P45452 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC13.85□□□□□ -0.19
MMP13P45452 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 AC092115.1-201ENST00000566277 1402 ntBASIC13.85□□□□□ -0.19
MMP13P45452 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.85□□□□□ -0.19
MMP13P45452 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC13.85□□□□□ -0.19
MMP13P45452 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.85□□□□□ -0.19
MMP13P45452 MIR33B-201ENST00000385104 96 ntBASIC13.85□□□□□ -0.19
MMP13P45452 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
MMP13P45452 SNU13-204ENST00000402458 462 ntTSL 3 BASIC13.85□□□□□ -0.19
MMP13P45452 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.85□□□□□ -0.19
MMP13P45452 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.85□□□□□ -0.19
MMP13P45452 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
MMP13P45452 ACTG1P19-201ENST00000418987 1116 ntBASIC13.85□□□□□ -0.19
MMP13P45452 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.85□□□□□ -0.19
MMP13P45452 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 AC226150.1-201ENST00000544259 466 ntBASIC13.85□□□□□ -0.19
MMP13P45452 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.85□□□□□ -0.19
MMP13P45452 NAA38-204ENST00000575208 529 ntTSL 3 BASIC13.85□□□□□ -0.19
MMP13P45452 MIR3147-201ENST00000577811 66 ntBASIC13.85□□□□□ -0.19
MMP13P45452 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
MMP13P45452 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
MMP13P45452 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
MMP13P45452 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.85□□□□□ -0.19
MMP13P45452 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MMP13P45452 POM121L4P-202ENST00000427789 1891 ntBASIC13.84□□□□□ -0.19
MMP13P45452 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.84□□□□□ -0.19
MMP13P45452 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 AC103563.1-201ENST00000429316 123 ntBASIC13.84□□□□□ -0.19
MMP13P45452 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.84□□□□□ -0.19
MMP13P45452 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.84□□□□□ -0.19
MMP13P45452 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC13.84□□□□□ -0.19
MMP13P45452 RN7SL23P-201ENST00000484055 275 ntBASIC13.84□□□□□ -0.19
MMP13P45452 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
MMP13P45452 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.84□□□□□ -0.19
MMP13P45452 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
MMP13P45452 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC13.84□□□□□ -0.19
MMP13P45452 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MMP13P45452 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms