Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 PGAM1P11-201ENST00000416729 680 ntBASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 CD37-203ENST00000426897 1204 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 NME6-208ENST00000435684 599 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 BCL2L12P1-201ENST00000508390 733 ntBASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 MIR5001-201ENST00000580185 100 ntBASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 TCAF1P1-201ENST00000414990 2232 ntBASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPA3F8WFD2 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 AC019294.4-201ENST00000561777 2905 ntBASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 PGK1P2-201ENST00000431702 1214 ntBASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms