Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 FOSL2-202ENST00000379619 5829 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 ABR-201ENST00000291107 2673 ntTSL 2 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 KRT8P29-201ENST00000420409 1371 ntBASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 FAM78A-202ENST00000372269 3659 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 KIF28P-202ENST00000504864 3064 ntBASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 MIR1202-201ENST00000408529 83 ntBASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 AC005722.1-201ENST00000431878 964 ntBASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 BX284668.4-201ENST00000453917 508 ntBASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 RN7SL277P-201ENST00000481521 288 ntBASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 AL137779.3-201ENST00000553295 729 ntBASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 AL160314.3-201ENST00000556041 767 ntBASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 AC100827.2-201ENST00000563214 1194 ntBASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMIM3Q9BZL3 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 KCNH8-201ENST00000328405 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 AC007608.4-201ENST00000623140 3365 ntBASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 PABPC1P2-201ENST00000471997 1805 ntBASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 AP000350.6-201ENST00000609510 5637 ntBASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 OACYLP-201ENST00000417918 2208 ntBASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 HLA-V-201ENST00000429037 534 ntBASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC10.91□□□□□ -0.66
SMIM3Q9BZL3 AC011742.3-201ENST00000439053 820 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms