Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
ALX3O95076 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 AC067931.2-201ENST00000623655 2003 ntBASIC11.93□□□□□ -0.5
ALX3O95076 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC11.93□□□□□ -0.5
ALX3O95076 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 CALR4P-201ENST00000431943 946 ntBASIC11.93□□□□□ -0.5
ALX3O95076 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
ALX3O95076 DUX4L50-201ENST00000455245 715 ntBASIC11.93□□□□□ -0.5
ALX3O95076 ARTN-209ENST00000479128 471 ntTSL 3 BASIC11.93□□□□□ -0.5
ALX3O95076 CD81-209ENST00000492627 886 ntTSL 3 BASIC11.93□□□□□ -0.5
ALX3O95076 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC11.93□□□□□ -0.5
ALX3O95076 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 COQ10BP2-201ENST00000513804 724 ntBASIC11.93□□□□□ -0.5
ALX3O95076 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC11.93□□□□□ -0.5
ALX3O95076 AC126915.1-201ENST00000522847 1038 ntBASIC11.93□□□□□ -0.5
ALX3O95076 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.93□□□□□ -0.5
ALX3O95076 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.93□□□□□ -0.5
ALX3O95076 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC11.93□□□□□ -0.5
ALX3O95076 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 KRT8P21-201ENST00000430398 1491 ntBASIC11.93□□□□□ -0.5
ALX3O95076 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ALX3O95076 AC011481.3-201ENST00000623895 5594 ntBASIC11.93□□□□□ -0.5
ALX3O95076 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC11.93□□□□□ -0.5
ALX3O95076 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 TIAM2-201ENST00000275246 2491 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALX3O95076 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC11.92□□□□□ -0.5
ALX3O95076 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ALX3O95076 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 PTPRVP-205ENST00000641549 5067 ntBASIC11.92□□□□□ -0.5
ALX3O95076 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC11.92□□□□□ -0.5
ALX3O95076 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC11.92□□□□□ -0.5
ALX3O95076 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.92□□□□□ -0.5
ALX3O95076 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 RCC2P5-201ENST00000492126 1487 ntBASIC11.92□□□□□ -0.5
ALX3O95076 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.92□□□□□ -0.5
ALX3O95076 RNA5SP359-201ENST00000364838 113 ntBASIC11.92□□□□□ -0.5
ALX3O95076 NCR3-202ENST00000376071 541 ntTSL 5 BASIC11.92□□□□□ -0.5
ALX3O95076 LBH-202ENST00000401506 485 ntTSL 3 BASIC11.92□□□□□ -0.5
ALX3O95076 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC11.92□□□□□ -0.5
ALX3O95076 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC11.92□□□□□ -0.5
ALX3O95076 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ALX3O95076 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC11.92□□□□□ -0.5
ALX3O95076 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC11.92□□□□□ -0.5
ALX3O95076 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC11.92□□□□□ -0.5
ALX3O95076 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ALX3O95076 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC11.92□□□□□ -0.5
ALX3O95076 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC11.92□□□□□ -0.5
ALX3O95076 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms