Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC9.54□□□□□ -0.88
CCL18P55774 CICP1-201ENST00000416803 2410 ntBASIC9.54□□□□□ -0.88
CCL18P55774 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCL18P55774 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CCL18P55774 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCL18P55774 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CCL18P55774 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCL18P55774 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC9.54□□□□□ -0.88
CCL18P55774 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCL18P55774 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC9.54□□□□□ -0.88
CCL18P55774 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCL18P55774 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC9.54□□□□□ -0.88
CCL18P55774 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CCL18P55774 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
CCL18P55774 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
CCL18P55774 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC9.54□□□□□ -0.88
CCL18P55774 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCL18P55774 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCL18P55774 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
CCL18P55774 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC9.53□□□□□ -0.88
CCL18P55774 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 FUCA1P1-201ENST00000374476 1351 ntBASIC9.53□□□□□ -0.88
CCL18P55774 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC9.53□□□□□ -0.88
CCL18P55774 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
CCL18P55774 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 AC093462.1-201ENST00000621167 1683 ntBASIC9.53□□□□□ -0.88
CCL18P55774 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 AC106827.1-201ENST00000366454 431 ntBASIC9.53□□□□□ -0.88
CCL18P55774 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 GCSHP3-201ENST00000431120 391 ntBASIC9.53□□□□□ -0.88
CCL18P55774 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC9.53□□□□□ -0.88
CCL18P55774 STK24P1-201ENST00000455035 1291 ntBASIC9.53□□□□□ -0.88
CCL18P55774 MT3-202ENST00000561640 514 ntTSL 3 BASIC9.53□□□□□ -0.88
CCL18P55774 COX5A-205ENST00000568517 582 ntTSL 3 BASIC9.53□□□□□ -0.88
CCL18P55774 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC9.53□□□□□ -0.88
CCL18P55774 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 AC005041.3-201ENST00000606287 649 ntBASIC9.53□□□□□ -0.88
CCL18P55774 AL118522.1-201ENST00000611368 560 ntBASIC9.53□□□□□ -0.88
CCL18P55774 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
CCL18P55774 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC9.53□□□□□ -0.88
CCL18P55774 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC9.53□□□□□ -0.88
CCL18P55774 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 NRADDP-202ENST00000641269 1585 ntBASIC9.53□□□□□ -0.88
CCL18P55774 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
CCL18P55774 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
CCL18P55774 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 TUBB4AP1-201ENST00000450755 1325 ntBASIC9.53□□□□□ -0.88
CCL18P55774 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
CCL18P55774 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCL18P55774 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
CCL18P55774 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CCL18P55774 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
CCL18P55774 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CCL18P55774 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
CCL18P55774 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.88
CCL18P55774 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.88
CCL18P55774 TUB-202ENST00000305253 6420 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CCL18P55774 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CCL18P55774 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC9.52□□□□□ -0.88
CCL18P55774 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms