Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
MMP13P45452 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
MMP13P45452 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC13.93□□□□□ -0.18
MMP13P45452 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
MMP13P45452 AC005041.3-201ENST00000606287 649 ntBASIC13.93□□□□□ -0.18
MMP13P45452 MIR8071-1-201ENST00000616769 65 ntBASIC13.93□□□□□ -0.18
MMP13P45452 MIR8071-2-201ENST00000616772 65 ntBASIC13.93□□□□□ -0.18
MMP13P45452 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP13P45452 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP13P45452 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 AC007336.3-201ENST00000623886 2160 ntBASIC13.93□□□□□ -0.18
MMP13P45452 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 AC026992.2-203ENST00000563004 2419 ntBASIC13.93□□□□□ -0.18
MMP13P45452 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 AC092139.4-201ENST00000624318 2794 ntBASIC13.93□□□□□ -0.18
MMP13P45452 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 EGLN3-205ENST00000547327 2849 ntBASIC13.92□□□□□ -0.18
MMP13P45452 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.92□□□□□ -0.18
MMP13P45452 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP13P45452 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
MMP13P45452 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP13P45452 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.92□□□□□ -0.18
MMP13P45452 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MMP13P45452 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.92□□□□□ -0.18
MMP13P45452 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.92□□□□□ -0.18
MMP13P45452 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP13P45452 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.92□□□□□ -0.18
MMP13P45452 AC079112.1-201ENST00000454972 939 ntBASIC13.92□□□□□ -0.18
MMP13P45452 AC079250.1-201ENST00000456046 531 ntBASIC13.92□□□□□ -0.18
MMP13P45452 RN7SL181P-201ENST00000462921 277 ntBASIC13.92□□□□□ -0.18
MMP13P45452 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.92□□□□□ -0.18
MMP13P45452 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MMP13P45452 CR383656.3-201ENST00000551315 183 ntBASIC13.92□□□□□ -0.18
MMP13P45452 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MMP13P45452 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP13P45452 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MMP13P45452 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.92□□□□□ -0.18
MMP13P45452 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 FAM90A17P-201ENST00000533716 1957 ntBASIC13.92□□□□□ -0.18
MMP13P45452 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
MMP13P45452 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
MMP13P45452 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP13P45452 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP13P45452 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
MMP13P45452 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms