Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC13.49□□□□□ -0.25
KDELR3O43731 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
KDELR3O43731 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.49□□□□□ -0.25
KDELR3O43731 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
KDELR3O43731 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
KDELR3O43731 RN7SKP102-201ENST00000411186 315 ntBASIC13.49□□□□□ -0.25
KDELR3O43731 IQCF4-203ENST00000428561 420 ntBASIC13.49□□□□□ -0.25
KDELR3O43731 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.49□□□□□ -0.25
KDELR3O43731 AC133141.1-201ENST00000443015 339 ntBASIC13.49□□□□□ -0.25
KDELR3O43731 AC114501.1-201ENST00000445949 172 ntBASIC13.49□□□□□ -0.25
KDELR3O43731 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.49□□□□□ -0.25
KDELR3O43731 PRDX2P3-201ENST00000515779 586 ntBASIC13.49□□□□□ -0.25
KDELR3O43731 IGHVII-74-1-201ENST00000517572 241 ntBASIC13.49□□□□□ -0.25
KDELR3O43731 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.49□□□□□ -0.25
KDELR3O43731 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC13.49□□□□□ -0.25
KDELR3O43731 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.49□□□□□ -0.25
KDELR3O43731 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.49□□□□□ -0.25
KDELR3O43731 KRT8P34-201ENST00000577607 1044 ntBASIC13.49□□□□□ -0.25
KDELR3O43731 MIR4687-201ENST00000583618 80 ntBASIC13.49□□□□□ -0.25
KDELR3O43731 AP005212.2-201ENST00000584979 510 ntBASIC13.49□□□□□ -0.25
KDELR3O43731 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.49□□□□□ -0.25
KDELR3O43731 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
KDELR3O43731 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 AFG3L2P1-201ENST00000521792 1763 ntBASIC13.49□□□□□ -0.25
KDELR3O43731 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.49□□□□□ -0.25
KDELR3O43731 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
KDELR3O43731 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
KDELR3O43731 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC13.48□□□□□ -0.25
KDELR3O43731 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
KDELR3O43731 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.48□□□□□ -0.25
KDELR3O43731 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
KDELR3O43731 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
KDELR3O43731 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 HSD3BP1-201ENST00000286193 1111 ntBASIC13.48□□□□□ -0.25
KDELR3O43731 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
KDELR3O43731 AL356653.1-201ENST00000402743 360 ntBASIC13.48□□□□□ -0.25
KDELR3O43731 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 IFNWP2-201ENST00000431203 580 ntBASIC13.48□□□□□ -0.25
KDELR3O43731 KRT8P30-201ENST00000432100 650 ntBASIC13.48□□□□□ -0.25
KDELR3O43731 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC13.48□□□□□ -0.25
KDELR3O43731 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC13.48□□□□□ -0.25
KDELR3O43731 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.48□□□□□ -0.25
KDELR3O43731 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC13.48□□□□□ -0.25
KDELR3O43731 AL451000.1-201ENST00000451300 1186 ntBASIC13.48□□□□□ -0.25
KDELR3O43731 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.48□□□□□ -0.25
KDELR3O43731 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.48□□□□□ -0.25
KDELR3O43731 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC13.48□□□□□ -0.25
KDELR3O43731 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC13.48□□□□□ -0.25
KDELR3O43731 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.48□□□□□ -0.25
KDELR3O43731 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.48□□□□□ -0.25
KDELR3O43731 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.48□□□□□ -0.25
KDELR3O43731 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC13.48□□□□□ -0.25
KDELR3O43731 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC13.48□□□□□ -0.25
KDELR3O43731 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC13.48□□□□□ -0.25
KDELR3O43731 AC010531.8-201ENST00000623341 685 ntBASIC13.48□□□□□ -0.25
KDELR3O43731 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms