Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AL513497.1-201ENST00000624273 2083 ntBASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AL512430.1-201ENST00000392575 860 ntBASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 HLA-DMA-203ENST00000395305 777 ntBASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AC005077.3-201ENST00000449614 213 ntBASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 MRPL22P1-201ENST00000505398 616 ntBASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 RN7SKP155-201ENST00000516031 288 ntBASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 HERC2P11-201ENST00000562845 725 ntBASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AC100756.2-201ENST00000569537 736 ntBASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AC087392.5-201ENST00000612517 489 ntBASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 PER1-202ENST00000354903 3115 ntTSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
HLA-DRB4X5D2U9 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 AC002350.2-201ENST00000623894 1828 ntBASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 AR-208ENST00000612452 10676 ntTSL 5 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 SSR4-202ENST00000370085 526 ntTSL 2 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 TUBB2BP1-201ENST00000404155 871 ntBASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC10.17□□□□□ -0.78
HLA-DRB4X5D2U9 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms