Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC11.83□□□□□ -0.51
AP3S1Q92572 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.51
AP3S1Q92572 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
AP3S1Q92572 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC11.83□□□□□ -0.52
AP3S1Q92572 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
AP3S1Q92572 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
AP3S1Q92572 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 AP000350.6-201ENST00000609510 5637 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 AC120024.4-201ENST00000624285 2143 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
AP3S1Q92572 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 MXRA5Y-201ENST00000420610 8000 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
AP3S1Q92572 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 AC106827.1-201ENST00000366454 431 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
AP3S1Q92572 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 AC006987.1-201ENST00000413610 527 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 BX679664.3-201ENST00000414070 555 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 FAM197Y7-201ENST00000432892 766 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 XBP1P1-201ENST00000436573 652 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.83□□□□□ -0.52
AP3S1Q92572 HIST2H2BB-201ENST00000449108 381 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 AC113935.1-201ENST00000471722 555 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.83□□□□□ -0.52
AP3S1Q92572 SLC25A15P3-201ENST00000505530 290 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.83□□□□□ -0.52
AP3S1Q92572 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
AP3S1Q92572 AC100827.2-201ENST00000563214 1194 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
AP3S1Q92572 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC11.83□□□□□ -0.52
AP3S1Q92572 AC079336.7-201ENST00000623428 1078 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC11.83□□□□□ -0.52
AP3S1Q92572 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
AP3S1Q92572 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 CCDC33-201ENST00000268082 2093 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 PTN-202ENST00000393083 1599 ntTSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC11.83□□□□□ -0.52
AP3S1Q92572 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 PCDHA4-204ENST00000618834 10557 ntBASIC11.83□□□□□ -0.52
AP3S1Q92572 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP3S1Q92572 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.83□□□□□ -0.52
AP3S1Q92572 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
AP3S1Q92572 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 DLX5-201ENST00000222598 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC11.82□□□□□ -0.52
AP3S1Q92572 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC11.82□□□□□ -0.52
AP3S1Q92572 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 TPI1P3-201ENST00000335020 740 ntBASIC11.82□□□□□ -0.52
AP3S1Q92572 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
AP3S1Q92572 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 DNAJB3-202ENST00000449667 1266 ntBASIC11.82□□□□□ -0.52
AP3S1Q92572 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms