Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 BX842568.3-201ENST00000418104 571 ntBASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 AC006455.2-201ENST00000429931 906 ntBASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 MIR3181-201ENST00000578512 73 ntBASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 AC233992.3-201ENST00000607491 485 ntBASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA6Q9Y5G7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHGA6Q9Y5G7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA6Q9Y5G7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA6Q9Y5G7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA6Q9Y5G7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 AL117328.2-201ENST00000624617 1940 ntBASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA6Q9Y5G7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 AC087623.3-201ENST00000607047 1098 ntBASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA6Q9Y5G7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA6Q9Y5G7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA6Q9Y5G7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHGA6Q9Y5G7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA6Q9Y5G7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA6Q9Y5G7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA6Q9Y5G7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHGA6Q9Y5G7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
PCDHGA6Q9Y5G7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms