Protein–RNA interactions for Protein: Q9UBN1

CACNG4, Voltage-dependent calcium channel gamma-4 subunit, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG4Q9UBN1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CACNG4Q9UBN1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.86■■□□□ 1.41
CACNG4Q9UBN1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.86■■□□□ 1.41
CACNG4Q9UBN1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CACNG4Q9UBN1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.86■■□□□ 1.41
CACNG4Q9UBN1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.85■■□□□ 1.41
CACNG4Q9UBN1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CACNG4Q9UBN1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.85■■□□□ 1.41
CACNG4Q9UBN1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.85■■□□□ 1.41
CACNG4Q9UBN1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.85■■□□□ 1.41
CACNG4Q9UBN1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 AC104564.3-201ENST00000582367 638 ntBASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CACNG4Q9UBN1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.83■■□□□ 1.41
CACNG4Q9UBN1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CACNG4Q9UBN1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.83■■□□□ 1.41
CACNG4Q9UBN1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CACNG4Q9UBN1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.83■■□□□ 1.41
CACNG4Q9UBN1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CACNG4Q9UBN1 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 MIR572-201ENST00000384983 95 ntBASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CACNG4Q9UBN1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNG4Q9UBN1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.8■■□□□ 1.4
CACNG4Q9UBN1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.8■■□□□ 1.4
CACNG4Q9UBN1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CACNG4Q9UBN1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CACNG4Q9UBN1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CACNG4Q9UBN1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CACNG4Q9UBN1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CACNG4Q9UBN1 AC012414.1-201ENST00000556676 535 ntBASIC23.8■■□□□ 1.4
CACNG4Q9UBN1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CACNG4Q9UBN1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CACNG4Q9UBN1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 YBX1P1-201ENST00000445822 960 ntBASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CACNG4Q9UBN1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 DUX4L2-201ENST00000561772 1275 ntBASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 DUX4L6-201ENST00000626483 1275 ntBASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 DUX4L1-201ENST00000627662 1275 ntBASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 DUX4L8-201ENST00000629013 1275 ntBASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 DUX4L3-201ENST00000630187 1275 ntBASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 DUX4L7-201ENST00000630678 1275 ntBASIC23.77■■□□□ 1.4
CACNG4Q9UBN1 DUX4L5-201ENST00000630834 1275 ntBASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms