Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH4Q9P003 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CNIH4Q9P003 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.65■□□□□ 0.9
CNIH4Q9P003 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH4Q9P003 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.64■□□□□ 0.9
CNIH4Q9P003 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNIH4Q9P003 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CNIH4Q9P003 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNIH4Q9P003 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CNIH4Q9P003 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH4Q9P003 AC110285.6-201ENST00000617652 491 ntBASIC20.64■□□□□ 0.89
CNIH4Q9P003 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.64■□□□□ 0.89
CNIH4Q9P003 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH4Q9P003 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CNIH4Q9P003 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.63■□□□□ 0.89
CNIH4Q9P003 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CNIH4Q9P003 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH4Q9P003 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH4Q9P003 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH4Q9P003 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH4Q9P003 UNC93B3-201ENST00000308076 687 ntBASIC20.63■□□□□ 0.89
CNIH4Q9P003 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CNIH4Q9P003 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.63■□□□□ 0.89
CNIH4Q9P003 AC099791.2-201ENST00000605725 427 ntBASIC20.63■□□□□ 0.89
CNIH4Q9P003 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.63■□□□□ 0.89
CNIH4Q9P003 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH4Q9P003 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH4Q9P003 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CNIH4Q9P003 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.62■□□□□ 0.89
CNIH4Q9P003 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH4Q9P003 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH4Q9P003 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH4Q9P003 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH4Q9P003 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH4Q9P003 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.62■□□□□ 0.89
CNIH4Q9P003 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CNIH4Q9P003 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH4Q9P003 SYT6-210ENST00000641643 1587 ntBASIC20.62■□□□□ 0.89
CNIH4Q9P003 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH4Q9P003 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.62■□□□□ 0.89
CNIH4Q9P003 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.62■□□□□ 0.89
CNIH4Q9P003 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH4Q9P003 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH4Q9P003 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH4Q9P003 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.61■□□□□ 0.89
CNIH4Q9P003 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH4Q9P003 AC133561.4-201ENST00000566112 224 ntBASIC20.61■□□□□ 0.89
CNIH4Q9P003 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.61■□□□□ 0.89
CNIH4Q9P003 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.61■□□□□ 0.89
CNIH4Q9P003 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH4Q9P003 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH4Q9P003 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CNIH4Q9P003 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CNIH4Q9P003 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.6■□□□□ 0.89
CNIH4Q9P003 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CNIH4Q9P003 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.6■□□□□ 0.89
CNIH4Q9P003 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 AL136162.1-201ENST00000607711 1078 ntBASIC20.6■□□□□ 0.89
CNIH4Q9P003 AC106739.1-201ENST00000617035 715 ntBASIC20.6■□□□□ 0.89
CNIH4Q9P003 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.6■□□□□ 0.89
CNIH4Q9P003 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CNIH4Q9P003 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CNIH4Q9P003 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH4Q9P003 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.59■□□□□ 0.89
CNIH4Q9P003 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH4Q9P003 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH4Q9P003 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH4Q9P003 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CNIH4Q9P003 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.59■□□□□ 0.89
CNIH4Q9P003 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH4Q9P003 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CNIH4Q9P003 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CNIH4Q9P003 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.59■□□□□ 0.89
CNIH4Q9P003 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH4Q9P003 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.59■□□□□ 0.89
CNIH4Q9P003 PBX2P1-201ENST00000493219 1291 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms