Protein–RNA interactions for Protein: Q9NQ03

SCRT2, Transcriptional repressor scratch 2, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT2Q9NQ03 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 AC022616.5-201ENST00000518796 181 ntBASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SCRT2Q9NQ03 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 AC019171.1-201ENST00000601251 1056 ntBASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCRT2Q9NQ03 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SCRT2Q9NQ03 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCRT2Q9NQ03 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 AC242852.2-201ENST00000615738 1807 ntBASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 AC129492.7-201ENST00000622992 756 ntBASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCRT2Q9NQ03 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCRT2Q9NQ03 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 AC079630.1-202ENST00000618127 1840 ntBASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 KRT18P60-201ENST00000312876 1297 ntBASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SCRT2Q9NQ03 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
SCRT2Q9NQ03 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCRT2Q9NQ03 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCRT2Q9NQ03 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCRT2Q9NQ03 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SCRT2Q9NQ03 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCRT2Q9NQ03 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms