Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
SSX3Q99909 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.42■□□□□ 0.54
SSX3Q99909 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SSX3Q99909 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.42■□□□□ 0.54
SSX3Q99909 AL512631.2-201ENST00000604634 923 ntBASIC18.42■□□□□ 0.54
SSX3Q99909 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.42■□□□□ 0.54
SSX3Q99909 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.42■□□□□ 0.54
SSX3Q99909 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SSX3Q99909 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX3Q99909 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SSX3Q99909 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.41■□□□□ 0.54
SSX3Q99909 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
SSX3Q99909 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.41■□□□□ 0.54
SSX3Q99909 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.41■□□□□ 0.54
SSX3Q99909 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SSX3Q99909 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX3Q99909 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX3Q99909 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX3Q99909 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.4■□□□□ 0.54
SSX3Q99909 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SSX3Q99909 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.4■□□□□ 0.54
SSX3Q99909 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.4■□□□□ 0.54
SSX3Q99909 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SSX3Q99909 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSX3Q99909 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX3Q99909 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SSX3Q99909 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX3Q99909 AL161729.1-201ENST00000604104 1402 ntBASIC18.4■□□□□ 0.54
SSX3Q99909 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.4■□□□□ 0.54
SSX3Q99909 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SSX3Q99909 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SSX3Q99909 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SSX3Q99909 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.39■□□□□ 0.54
SSX3Q99909 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.39■□□□□ 0.53
SSX3Q99909 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX3Q99909 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX3Q99909 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX3Q99909 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX3Q99909 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX3Q99909 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SSX3Q99909 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX3Q99909 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.39■□□□□ 0.53
SSX3Q99909 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX3Q99909 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX3Q99909 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SSX3Q99909 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SSX3Q99909 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SSX3Q99909 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX3Q99909 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SSX3Q99909 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SSX3Q99909 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX3Q99909 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SSX3Q99909 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SSX3Q99909 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.38■□□□□ 0.53
SSX3Q99909 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX3Q99909 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX3Q99909 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.38■□□□□ 0.53
SSX3Q99909 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX3Q99909 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX3Q99909 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX3Q99909 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX3Q99909 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.37■□□□□ 0.53
SSX3Q99909 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SSX3Q99909 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX3Q99909 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.37■□□□□ 0.53
SSX3Q99909 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX3Q99909 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX3Q99909 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX3Q99909 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms